Variant report

Variant rs2607940
Chromosome Location chr12:680289-680290
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:677400-682000 Enhancers Fetal Heart heart
2 chr12:678200-681800 Enhancers Spleen Spleen
3 chr12:678600-680400 Active TSS Rectal Smooth Muscle rectum
4 chr12:678600-680800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
5 chr12:678600-681000 Enhancers Small Intestine intestine
6 chr12:678600-681000 Flanking Active TSS Stomach Smooth Muscle stomach
7 chr12:678600-681800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
8 chr12:678800-680400 Active TSS H9 Cell Line embryonic stem cell
9 chr12:678800-680400 Active TSS iPS-15b Cell Line embryonic stem cell
10 chr12:678800-680400 Active TSS Duodenum Smooth Muscle Duodenum
11 chr12:678800-680600 Active TSS HUES64 Cell Line embryonic stem cell
12 chr12:678800-680600 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
13 chr12:678800-680600 Active TSS iPS-20b Cell Line embryonic stem cell
14 chr12:678800-680600 Flanking Active TSS Fetal Muscle Trunk muscle
15 chr12:678800-680800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
16 chr12:678800-680800 Flanking Active TSS NHLF lung
17 chr12:678800-681000 Flanking Active TSS Osteobl bone
18 chr12:678800-681400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
19 chr12:678800-681400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
20 chr12:679000-680400 Active TSS iPS-18 Cell Line embryonic stem cell
21 chr12:679000-680400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
22 chr12:679000-680400 Active TSS Left Ventricle heart
23 chr12:679000-680400 Active TSS Hela-S3 cervix
24 chr12:679000-680600 Active TSS ES-WA7 Cell Line embryonic stem cell
25 chr12:679000-680600 Active TSS Psoas Muscle Psoas
26 chr12:679000-680600 Active TSS Right Atrium heart
27 chr12:679000-680800 Active TSS A549 lung
28 chr12:679000-681000 Flanking Active TSS HMEC breast
29 chr12:679200-680400 Flanking Active TSS NH-A brain
30 chr12:679200-680600 Flanking Active TSS Stomach Mucosa stomach
31 chr12:679200-680800 Active TSS Aorta Aorta
32 chr12:679200-680800 Flanking Active TSS Colonic Mucosa Colon
33 chr12:679200-680800 Flanking Active TSS Duodenum Mucosa Duodenum
34 chr12:679200-680800 Flanking Active TSS NHEK skin
35 chr12:679200-681200 Flanking Active TSS HSMM muscle
36 chr12:679400-680400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
37 chr12:679400-680400 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr12:679400-680400 Bivalent/Poised TSS HepG2 liver
39 chr12:679400-680400 Flanking Active TSS K562 blood
40 chr12:679400-680600 Enhancers Primary hematopoietic stem cells short term culture blood
41 chr12:679400-680600 Flanking Active TSS HSMMtube muscle
42 chr12:679400-680800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr12:679400-680800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr12:679400-681600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr12:679600-680400 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr12:679600-680400 Active TSS Adipose Nuclei Adipose
47 chr12:679600-680600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
48 chr12:679600-680600 Enhancers Fetal Thymus thymus
49 chr12:679600-684200 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr12:679600-684800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links