Variant report

Variant rs2550892
Chromosome Location chr16:75539885-75539886
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:75529400-75550000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr16:75529600-75541800 Weak transcription Right Atrium heart
3 chr16:75529800-75550200 Weak transcription Spleen Spleen
4 chr16:75532600-75540000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr16:75532600-75549800 Weak transcription Brain Anterior Caudate brain
6 chr16:75532800-75550400 Weak transcription Brain Inferior Temporal Lobe brain
7 chr16:75533800-75550200 Weak transcription Small Intestine intestine
8 chr16:75534200-75550400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr16:75534400-75550600 Weak transcription Aorta Aorta
10 chr16:75534600-75547400 Weak transcription Fetal Intestine Small intestine
11 chr16:75535600-75550200 Weak transcription Brain Hippocampus Middle brain
12 chr16:75535800-75543400 Weak transcription HSMMtube muscle
13 chr16:75536000-75550200 Weak transcription Brain Cingulate Gyrus brain
14 chr16:75536200-75540000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr16:75536200-75540000 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr16:75536200-75550000 Weak transcription Colon Smooth Muscle Colon
17 chr16:75536400-75549800 Weak transcription Stomach Smooth Muscle stomach
18 chr16:75536400-75550000 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr16:75536400-75550000 Weak transcription Brain Substantia Nigra brain
20 chr16:75536800-75540400 Weak transcription Fetal Muscle Leg muscle
21 chr16:75537200-75540000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr16:75538000-75540200 Weak transcription A549 lung
23 chr16:75538000-75550000 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr16:75538200-75541800 Weak transcription Fetal Muscle Trunk muscle
25 chr16:75538400-75546000 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr16:75538400-75550200 Weak transcription Duodenum Mucosa Duodenum
27 chr16:75539200-75541200 Enhancers HepG2 liver
28 chr16:75539200-75543400 Enhancers Hela-S3 cervix
29 chr16:75539400-75541200 Enhancers Primary monocytes fromperipheralblood blood
30 chr16:75539600-75540000 Enhancers Monocytes-CD14+_RO01746 blood
31 chr16:75539600-75540200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr16:75539600-75540800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr16:75539600-75541000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr16:75539800-75540200 Enhancers Muscle Satellite Cultured Cells --
35 chr16:75539800-75540400 Enhancers Osteobl bone
36 chr16:75539800-75541000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr16:75539800-75541000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr16:75539800-75541000 Enhancers HMEC breast
39 chr16:75539800-75541000 Enhancers NHEK skin

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