Variant report

Variant rs2650406
Chromosome Location chr16:75536272-75536273
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:75529400-75550000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr16:75529600-75541800 Weak transcription Right Atrium heart
3 chr16:75529800-75537800 Weak transcription Duodenum Mucosa Duodenum
4 chr16:75529800-75550200 Weak transcription Spleen Spleen
5 chr16:75532600-75536400 Weak transcription Hela-S3 cervix
6 chr16:75532600-75537000 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr16:75532600-75540000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr16:75532600-75549800 Weak transcription Brain Anterior Caudate brain
9 chr16:75532800-75550400 Weak transcription Brain Inferior Temporal Lobe brain
10 chr16:75533800-75537000 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr16:75533800-75550200 Weak transcription Small Intestine intestine
12 chr16:75534200-75550400 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr16:75534400-75550600 Weak transcription Aorta Aorta
14 chr16:75534600-75538200 Enhancers Fetal Muscle Trunk muscle
15 chr16:75534600-75547400 Weak transcription Fetal Intestine Small intestine
16 chr16:75535000-75536800 Enhancers Fetal Muscle Leg muscle
17 chr16:75535200-75536400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr16:75535200-75536400 Strong transcription Rectal Mucosa Donor 31 rectum
19 chr16:75535200-75536600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr16:75535400-75536400 Enhancers Muscle Satellite Cultured Cells --
21 chr16:75535400-75536400 Enhancers Cortex derived primary cultured neurospheres brain
22 chr16:75535400-75536400 Enhancers Placenta Placenta
23 chr16:75535400-75538000 Enhancers HMEC breast
24 chr16:75535600-75536400 Enhancers Brain Substantia Nigra brain
25 chr16:75535600-75536400 Enhancers Fetal Brain Male brain
26 chr16:75535600-75536400 Enhancers Rectal Smooth Muscle rectum
27 chr16:75535600-75550200 Weak transcription Brain Hippocampus Middle brain
28 chr16:75535800-75536400 Enhancers Stomach Smooth Muscle stomach
29 chr16:75535800-75537600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr16:75535800-75538000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr16:75535800-75543400 Weak transcription HSMMtube muscle
32 chr16:75536000-75537200 Enhancers NHEK skin
33 chr16:75536000-75550200 Weak transcription Brain Cingulate Gyrus brain
34 chr16:75536200-75536600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr16:75536200-75540000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr16:75536200-75540000 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr16:75536200-75550000 Weak transcription Colon Smooth Muscle Colon

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