Variant report

Variant rs2560761
Chromosome Location chr6:13455147-13455148
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:13438600-13462200 Weak transcription H9 Cell Line embryonic stem cell
2 chr6:13445200-13457800 Enhancers Right Atrium heart
3 chr6:13445600-13461800 Weak transcription H1 Cell Line embryonic stem cell
4 chr6:13448200-13458200 Enhancers Colon Smooth Muscle Colon
5 chr6:13449000-13457200 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr6:13449000-13461800 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr6:13449600-13455800 Weak transcription Aorta Aorta
8 chr6:13451800-13458600 Weak transcription HepG2 liver
9 chr6:13452000-13455200 Enhancers Rectal Smooth Muscle rectum
10 chr6:13452000-13456400 Enhancers Fetal Stomach stomach
11 chr6:13452000-13456600 Enhancers Duodenum Smooth Muscle Duodenum
12 chr6:13452000-13462000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr6:13452200-13483400 Weak transcription Gastric stomach
14 chr6:13452400-13460800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr6:13452800-13457000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr6:13453200-13456200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr6:13453400-13455200 Enhancers Small Intestine intestine
18 chr6:13453400-13455400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr6:13453400-13455400 Enhancers HUVEC blood vessel
20 chr6:13453400-13455600 Enhancers NHEK skin
21 chr6:13453400-13455800 Enhancers NHLF lung
22 chr6:13453400-13456200 Enhancers NH-A brain
23 chr6:13453400-13461800 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr6:13453800-13455600 Enhancers Primary neutrophils fromperipheralblood blood
25 chr6:13453800-13456200 Enhancers HMEC breast
26 chr6:13453800-13456400 Enhancers Fetal Heart heart
27 chr6:13453800-13458800 Enhancers Left Ventricle heart
28 chr6:13453800-13459000 Enhancers Skeletal Muscle Male skeletal muscle
29 chr6:13453800-13459200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr6:13454000-13455200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr6:13454000-13455200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr6:13454000-13455200 Enhancers Pancreas Pancrea
33 chr6:13454000-13455200 Enhancers Stomach Mucosa stomach
34 chr6:13454000-13455400 Enhancers Esophagus oesophagus
35 chr6:13454000-13455400 Enhancers Placenta Amnion Placenta Amnion
36 chr6:13454000-13455400 Enhancers HSMM muscle
37 chr6:13454000-13455600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr6:13454000-13455600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
39 chr6:13454000-13455600 Enhancers NHDF-Ad bronchial
40 chr6:13454000-13455800 Enhancers Primary monocytes fromperipheralblood blood
41 chr6:13454000-13455800 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr6:13454000-13455800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr6:13454000-13455800 Enhancers Muscle Satellite Cultured Cells --
44 chr6:13454000-13456200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr6:13454000-13456200 Enhancers Sigmoid Colon Sigmoid Colon
46 chr6:13454000-13456200 Enhancers Spleen Spleen
47 chr6:13454000-13456200 Enhancers Dnd41 blood
48 chr6:13454000-13456400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
49 chr6:13454000-13456600 Enhancers Cortex derived primary cultured neurospheres brain
50 chr6:13454000-13456600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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