Variant report

Variant rs2562352
Chromosome Location chr5:16899202-16899203
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16894400-16900000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr5:16895000-16903000 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr5:16895600-16902000 Enhancers Hela-S3 cervix
4 chr5:16896000-16901200 Weak transcription Spleen Spleen
5 chr5:16896000-16912400 Weak transcription Esophagus oesophagus
6 chr5:16896400-16901200 Weak transcription Left Ventricle heart
7 chr5:16897000-16901200 Weak transcription Fetal Muscle Trunk muscle
8 chr5:16897000-16902800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr5:16897600-16902000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr5:16898000-16900400 Weak transcription Fetal Brain Male brain
11 chr5:16898000-16901800 Weak transcription HSMMtube muscle
12 chr5:16898000-16902800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr5:16898000-16902800 Weak transcription HSMM muscle
14 chr5:16898200-16899400 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr5:16898200-16899400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr5:16898200-16899400 Weak transcription Pancreas Pancrea
17 chr5:16898200-16899600 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr5:16898200-16900200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr5:16898200-16900200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr5:16898200-16900200 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr5:16898200-16900200 Weak transcription NHDF-Ad bronchial
22 chr5:16898200-16900400 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr5:16898200-16900400 Weak transcription Fetal Brain Female brain
24 chr5:16898200-16900400 Weak transcription Stomach Mucosa stomach
25 chr5:16898200-16901200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr5:16898200-16901200 Weak transcription Gastric stomach
27 chr5:16898200-16901200 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr5:16898200-16901400 Weak transcription ES-WA7 Cell Line embryonic stem cell
29 chr5:16898200-16901400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr5:16898200-16901600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
31 chr5:16898200-16901600 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr5:16898200-16902600 Weak transcription Muscle Satellite Cultured Cells --
33 chr5:16898200-16902800 Weak transcription Colon Smooth Muscle Colon
34 chr5:16898200-16903000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr5:16898200-16903400 Weak transcription Placenta Placenta
36 chr5:16898200-16903800 Weak transcription Osteobl bone
37 chr5:16898200-16904000 Weak transcription NHLF lung
38 chr5:16898200-16906200 Weak transcription Psoas Muscle Psoas
39 chr5:16898200-16912600 Weak transcription NH-A brain
40 chr5:16898400-16899400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr5:16898400-16899400 Weak transcription HUVEC blood vessel
42 chr5:16898400-16899600 Weak transcription H1 Cell Line embryonic stem cell
43 chr5:16898400-16899800 Weak transcription H9 Cell Line embryonic stem cell
44 chr5:16898400-16899800 Weak transcription Fetal Muscle Leg muscle
45 chr5:16898400-16900200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr5:16898400-16900200 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr5:16898400-16900200 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr5:16898400-16900400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr5:16898400-16900400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr5:16898400-16900400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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