Variant report

Variant rs2586393
Chromosome Location chr1:172256116-172256117
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172239000-172262000 Weak transcription Fetal Muscle Leg muscle
2 chr1:172251800-172257000 Weak transcription Right Ventricle heart
3 chr1:172253000-172257200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr1:172254800-172257200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr1:172254800-172258400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:172255000-172256600 Enhancers Primary hematopoietic stem cells short term culture blood
7 chr1:172255000-172256600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr1:172255200-172256400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:172255400-172256200 Enhancers Brain Anterior Caudate brain
10 chr1:172255400-172256200 Enhancers Brain Hippocampus Middle brain
11 chr1:172255400-172256400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:172255400-172256400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:172255400-172256400 Enhancers HSMMtube muscle
14 chr1:172255400-172256600 Enhancers Brain Inferior Temporal Lobe brain
15 chr1:172255400-172256600 Enhancers Fetal Lung lung
16 chr1:172255400-172256600 Enhancers Hela-S3 cervix
17 chr1:172255400-172256800 Enhancers Muscle Satellite Cultured Cells --
18 chr1:172255400-172256800 Enhancers HMEC breast
19 chr1:172255400-172257200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:172255400-172257600 Enhancers NHLF lung
21 chr1:172255400-172257800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:172255400-172257800 Enhancers Fetal Adrenal Gland Adrenal Gland
23 chr1:172255600-172256200 Enhancers Placenta Amnion Placenta Amnion
24 chr1:172255600-172256200 Enhancers Skeletal Muscle Female skeletal muscle
25 chr1:172255600-172256400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr1:172255600-172256400 Enhancers Colon Smooth Muscle Colon
27 chr1:172255600-172256600 Enhancers NH-A brain
28 chr1:172255600-172256800 Enhancers Adipose Nuclei Adipose
29 chr1:172255800-172256200 Enhancers Left Ventricle heart
30 chr1:172255800-172256200 Enhancers Pancreas Pancrea
31 chr1:172255800-172256200 Enhancers Stomach Mucosa stomach
32 chr1:172255800-172256400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:172255800-172256400 Enhancers Aorta Aorta
34 chr1:172255800-172256400 Enhancers Gastric stomach
35 chr1:172255800-172256600 Enhancers Brain Substantia Nigra brain
36 chr1:172255800-172256600 Enhancers Fetal Heart heart
37 chr1:172255800-172256600 Enhancers Ovary ovary
38 chr1:172255800-172256600 Enhancers NHEK skin
39 chr1:172255800-172257400 Enhancers A549 lung
40 chr1:172255800-172257800 Enhancers Right Atrium heart
41 chr1:172255800-172258000 Enhancers NHDF-Ad bronchial
42 chr1:172256000-172256200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:172256000-172256200 Enhancers Brain Angular Gyrus brain
44 chr1:172256000-172256200 Enhancers Esophagus oesophagus
45 chr1:172256000-172256200 Enhancers Psoas Muscle Psoas
46 chr1:172256000-172256400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:172256000-172256400 Flanking Active TSS HSMM muscle
48 chr1:172256000-172256400 Flanking Active TSS Osteobl bone
49 chr1:172256000-172256600 Enhancers Primary hematopoietic stem cells blood

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