Variant report

Variant rs2596481
Chromosome Location chr6:31372587-31372588
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31367800-31372600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr6:31370600-31372800 Active TSS H9 Cell Line embryonic stem cell
3 chr6:31370600-31372800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
4 chr6:31370800-31372600 Active TSS NHLF lung
5 chr6:31370800-31372800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
6 chr6:31371000-31372600 Active TSS HUES48 Cell Line embryonic stem cell
7 chr6:31371000-31372600 Active TSS HSMM muscle
8 chr6:31371000-31372800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr6:31371200-31372800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr6:31371400-31372600 Flanking Active TSS Stomach Smooth Muscle stomach
11 chr6:31371800-31372600 Flanking Active TSS Duodenum Mucosa Duodenum
12 chr6:31371800-31372600 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
13 chr6:31371800-31372600 Enhancers Stomach Mucosa stomach
14 chr6:31372000-31372600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
15 chr6:31372000-31372600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
16 chr6:31372000-31372600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
17 chr6:31372000-31372600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
18 chr6:31372000-31372600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
19 chr6:31372000-31372600 Bivalent Enhancer Placenta Placenta
20 chr6:31372000-31372600 Enhancers Sigmoid Colon Sigmoid Colon
21 chr6:31372000-31372600 Enhancers Small Intestine intestine
22 chr6:31372000-31373800 Genic enhancers Dnd41 blood
23 chr6:31372000-31378400 Weak transcription Aorta Aorta
24 chr6:31372200-31372600 Flanking Active TSS H1 Cell Line embryonic stem cell
25 chr6:31372200-31372600 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr6:31372200-31372600 Enhancers Primary monocytes fromperipheralblood blood
27 chr6:31372200-31372600 Enhancers Primary Natural Killer cells fromperipheralblood blood
28 chr6:31372200-31372600 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr6:31372200-31372600 Flanking Active TSS Muscle Satellite Cultured Cells --
30 chr6:31372200-31372600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr6:31372200-31372600 Enhancers Liver Liver
32 chr6:31372200-31372600 Enhancers Fetal Heart heart
33 chr6:31372200-31372600 Bivalent Enhancer Fetal Stomach stomach
34 chr6:31372200-31372600 Enhancers Gastric stomach
35 chr6:31372200-31372600 Enhancers Pancreas Pancrea
36 chr6:31372200-31372600 Flanking Active TSS Hela-S3 cervix
37 chr6:31372200-31372600 Flanking Active TSS HUVEC blood vessel
38 chr6:31372200-31372600 Flanking Active TSS NHEK skin
39 chr6:31372200-31372800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr6:31372200-31372800 Enhancers Primary T cells fromperipheralblood blood
41 chr6:31372200-31372800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
42 chr6:31372200-31372800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
43 chr6:31372200-31372800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
44 chr6:31372200-31372800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr6:31372200-31372800 Flanking Active TSS HepG2 liver
46 chr6:31372200-31372800 Flanking Active TSS HMEC breast
47 chr6:31372200-31373600 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr6:31372200-31374000 Enhancers Primary T helper cells fromperipheralblood blood
49 chr6:31372200-31378200 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr6:31372400-31372600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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