The 2.0 version of rSNPBase

Variant report

Variant rs2647495
Chromosome Location chr1:77979327-77979328
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77969600-77981600 Enhancers HUVEC blood vessel
2 chr1:77971000-77980400 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr1:77971200-77980600 Weak transcription Primary hematopoietic stem cells blood
4 chr1:77973600-77983400 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr1:77974600-77982200 Enhancers NHDF-Ad bronchial
6 chr1:77975200-77979600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr1:77977400-77979600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr1:77977600-77979400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:77977600-77979400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:77977600-77979400 Weak transcription Brain Angular Gyrus brain
11 chr1:77977600-77979400 Weak transcription HMEC breast
12 chr1:77977800-77979400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:77977800-77979400 Enhancers Muscle Satellite Cultured Cells --
14 chr1:77977800-77979400 Weak transcription Brain Germinal Matrix brain
15 chr1:77977800-77979400 Weak transcription Brain Substantia Nigra brain
16 chr1:77977800-77979600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr1:77977800-77979600 Weak transcription Hela-S3 cervix
18 chr1:77977800-77979600 Enhancers HSMM muscle
19 chr1:77977800-77980400 Weak transcription Ovary ovary
20 chr1:77978000-77979800 Weak transcription A549 lung
21 chr1:77978200-77979400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:77978600-77980400 Enhancers NHLF lung
23 chr1:77978600-77981200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:77978800-77979600 Enhancers HSMMtube muscle
25 chr1:77978800-77979800 Enhancers NH-A brain
26 chr1:77978800-77980000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:77978800-77980600 Enhancers Brain Anterior Caudate brain
28 chr1:77978800-77981400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:77978800-77981600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
30 chr1:77978800-77981800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:77978800-77982000 Enhancers Brain Inferior Temporal Lobe brain
32 chr1:77978800-77982400 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr1:77978800-77983000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:77979000-77979400 Weak transcription Fetal Muscle Leg muscle
35 chr1:77979000-77980400 Enhancers Brain Hippocampus Middle brain
36 chr1:77979000-77981400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr1:77979000-77981800 Enhancers Osteobl bone
38 chr1:77979200-77979600 Enhancers Fetal Muscle Trunk muscle
39 chr1:77979200-77980600 Enhancers Brain Cingulate Gyrus brain
40 chr1:77979200-77981000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:77979200-77983000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr1:77979200-77984000 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015