Variant report

Variant	rs2650404
Chromosome Location	chr16:75543371-75543372
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:83)
CpG islands
(count:0)
Chromatin interactive
region (count:5)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:83 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT5A	chr16:75543242-75543692	K562	blood:	n/a	n/a
2	GATA2	chr16:75543231-75544018	K562	blood:	n/a	n/a
3	IRF1	chr16:75543305-75543893	K562	blood:	n/a	n/a
4	TEAD4	chr16:75543088-75544124	K562	blood:	n/a	n/a
5	POLR2A	chr16:75543284-75543716	K562	blood:	n/a	n/a
6	CBX3	chr16:75543145-75543731	K562	blood:	n/a	n/a
7	ELF1	chr16:75543268-75543689	K562	blood:	n/a	n/a
8	ZNF274	chr16:75543070-75543661	K562	blood:	n/a	n/a
9	TBL1XR1	chr16:75543310-75544018	K562	blood:	n/a	n/a
10	GATA1	chr16:75543237-75543850	PBDE	blood:	n/a	n/a
11	ZMIZ1	chr16:75543191-75543986	K562	blood:	n/a	n/a
12	JUN	chr16:75543307-75543954	K562	blood:	n/a	n/a
13	POLR2A	chr16:75543334-75543664	K562	blood:	n/a	n/a
14	MYC	chr16:75543314-75543898	K562	blood:	n/a	n/a
15	POLR2A	chr16:75543341-75543717	K562	blood:	n/a	n/a
16	CCNT2	chr16:75543308-75543999	K562	blood:	n/a	n/a
17	POLR2A	chr16:75543207-75543657	HCT-116	colon:	n/a	n/a
18	STAT5A	chr16:75543188-75544021	K562	blood:	n/a	n/a
19	RAD21	chr16:75543341-75543666	Hela-S3	cervix:	n/a	n/a
20	EP300	chr16:75543359-75543739	K562	blood:	n/a	n/a
21	MAZ	chr16:75543270-75543965	K562	blood:	n/a	n/a
22	MAFF	chr16:75543354-75543823	K562	blood:	n/a	n/a
23	MAX	chr16:75543249-75543927	K562	blood:	n/a	n/a
24	PML	chr16:75543219-75543996	K562	blood:	n/a	n/a
25	SP1	chr16:75543184-75543726	A549	lung:	n/a	n/a
26	SMC3	chr16:75543325-75543718	K562	blood:	n/a	n/a
27	PML	chr16:75543189-75543768	K562	blood:	n/a	n/a
28	NR2F2	chr16:75543232-75544094	K562	blood:	n/a	n/a
29	FOS	chr16:75543319-75543624	MCF10A-Er-Src	breast:	n/a	n/a
30	MAX	chr16:75543333-75543667	Hela-S3	cervix:	n/a	n/a
31	POLR2A	chr16:75543239-75544009	K562	blood:	n/a	n/a
32	NR2F2	chr16:75543215-75544104	K562	blood:	n/a	n/a
33	MAX	chr16:75543335-75543890	K562	blood:	n/a	n/a
34	JUND	chr16:75543241-75543995	K562	blood:	n/a	n/a
35	HDAC2	chr16:75543245-75543741	K562	blood:	n/a	n/a
36	MYC	chr16:75543357-75543557	MCF10A-Er-Src	breast:	n/a	n/a
37	GATA2	chr16:75543273-75544006	K562	blood:	n/a	n/a
38	JUN	chr16:75543252-75544016	K562	blood:	n/a	n/a
39	FOS	chr16:75543319-75543597	MCF10A-Er-Src	breast:	n/a	n/a
40	BHLHE40	chr16:75543277-75543975	K562	blood:	n/a	n/a
41	FOS	chr16:75543342-75543572	MCF10A-Er-Src	breast:	n/a	n/a
42	FOSL1	chr16:75543232-75543568	K562	blood:	n/a	chr16:75543432-75543443
43	ZNF143	chr16:75543276-75543671	K562	blood:	n/a	n/a
44	CEBPB	chr16:75543295-75543635	Hela-S3	cervix:	n/a	n/a
45	FOSL1	chr16:75543217-75543678	K562	blood:	n/a	chr16:75543432-75543443
46	ATF1	chr16:75543362-75543935	K562	blood:	n/a	n/a
47	UBTF	chr16:75543312-75543658	K562	blood:	n/a	n/a
48	EP300	chr16:75543301-75544008	K562	blood:	n/a	n/a
49	KAP1	chr16:75543266-75543800	HEK293	kidney:	n/a	n/a
50	HMGN3	chr16:75543293-75543592	K562	blood:	n/a	n/a

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr16:75496257..75499246-chr16:75542255..75545311,3	MCF-7	breast:
2	chr16:75541323..75546353-chr16:75547690..75552176,10	MCF-7	breast:
3	chr16:75523790..75524565-chr16:75542425..75543396,2	K562	blood:
4	chr16:75529289..75531150-chr16:75543079..75544974,2	K562	blood:
5	chr16:75542394..75545244-chr16:75549898..75552701,3	K562	blood:

No data

Variant related genes	Relation type
ENSG00000262583	TF binding region
ENSG00000166822	Chromatin interaction
ENSG00000261717	Chromatin interaction
ENSG00000262583	Chromatin interaction

Extended variants
information (count: 72 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs2242408	0.87[EUR][1000 genomes]
rs2453141	0.89[EUR][1000 genomes]
rs2550883	0.89[EUR][1000 genomes]
rs2550884	0.89[EUR][1000 genomes]
rs2550888	0.87[EUR][1000 genomes]
rs2650402	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2738795	0.92[EUR][1000 genomes]
rs2738798	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2738799	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7187954	0.88[ASN][1000 genomes]
rs7188455	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:61 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916502	chr16:74845880-75732365	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	131 gene(s)	inside rSNPs	diseases
2	nsv931939	chr16:75261354-75765025	Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
3	nsv1065995	chr16:75373756-75626027	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	65 gene(s)	inside rSNPs	diseases
4	nsv1063718	chr16:75395969-75608071	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases
5	esv2758432	chr16:75419614-75576971	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
6	esv2758657	chr16:75419614-75576971	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
7	nsv525955	chr16:75473332-75628345	Strong transcription Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
8	nsv457521	chr16:75487758-75603925	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
9	nsv572979	chr16:75487758-75603925	Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
10	esv3485939	chr16:75497453-75550284	Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
11	esv3485940	chr16:75497453-75550284	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
12	nsv572980	chr16:75505046-75549885	Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
13	esv3313995	chr16:75512166-75566404	Weak transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
14	esv3313996	chr16:75512166-75566404	Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
15	nsv532561	chr16:75519574-75636977	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
16	nsv572981	chr16:75521030-75581160	Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
17	nsv1059777	chr16:75522954-75572713	Bivalent/Poised TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
18	nsv516675	chr16:75528511-75572012	Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
19	nsv906914	chr16:75528511-75573884	Strong transcription Enhancers Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
20	nsv906915	chr16:75528511-75574729	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
21	nsv906916	chr16:75528511-75579233	Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
22	nsv906917	chr16:75528511-75581160	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
23	esv3509911	chr16:75531267-75573060	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
24	esv3509912	chr16:75531267-75573060	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
25	esv2647265	chr16:75532031-75573468	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
26	nsv906918	chr16:75532044-75573884	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
27	nsv906919	chr16:75532044-75579233	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
28	esv3430822	chr16:75532230-75572596	Weak transcription Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
29	esv3417877	chr16:75532542-75572654	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
30	nsv1062535	chr16:75533659-75575997	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
31	nsv1065709	chr16:75533659-75583008	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
32	esv2763141	chr16:75533671-75575998	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
33	nsv1060637	chr16:75534278-75575997	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
34	nsv1055697	chr16:75535360-75575997	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
35	nsv9461	chr16:75536123-75576182	Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
36	nsv1057506	chr16:75536272-75575997	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
37	nsv827748	chr16:75538442-75580713	Enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
38	nsv870450	chr16:75538457-75591359	Enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	41 gene(s)	inside rSNPs	diseases
39	esv3415643	chr16:75538811-75579509	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
40	nsv827749	chr16:75539113-75579358	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
41	nsv827750	chr16:75539336-75579358	Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
42	nsv1056522	chr16:75539396-75575997	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
43	esv2762311	chr16:75539408-75575998	Strong transcription Active TSS Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
44	esv2830028	chr16:75539436-75571923	Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
45	nsv906920	chr16:75539436-75573884	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
46	nsv572982	chr16:75539436-75574521	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
47	nsv572983	chr16:75539436-75575410	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
48	esv3693226	chr16:75539436-75575997	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
49	nsv572984	chr16:75539436-75579233	Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
50	nsv906921	chr16:75539436-75579233	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2650404	KARS	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:45 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:75529400-75550000	Weak transcription	Rectal Mucosa Donor 29	rectum
2	chr16:75529800-75550200	Weak transcription	Spleen	Spleen
3	chr16:75532600-75549800	Weak transcription	Brain Anterior Caudate	brain
4	chr16:75532800-75550400	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr16:75533800-75550200	Weak transcription	Small Intestine	intestine
6	chr16:75534200-75550400	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr16:75534400-75550600	Weak transcription	Aorta	Aorta
8	chr16:75534600-75547400	Weak transcription	Fetal Intestine Small	intestine
9	chr16:75535600-75550200	Weak transcription	Brain Hippocampus Middle	brain
10	chr16:75535800-75543400	Weak transcription	HSMMtube	muscle
11	chr16:75536000-75550200	Weak transcription	Brain Cingulate Gyrus	brain
12	chr16:75536200-75550000	Weak transcription	Colon Smooth Muscle	Colon
13	chr16:75536400-75549800	Weak transcription	Stomach Smooth Muscle	stomach
14	chr16:75536400-75550000	Weak transcription	Cortex derived primary cultured neurospheres	brain
15	chr16:75536400-75550000	Weak transcription	Brain Substantia Nigra	brain
16	chr16:75538000-75550000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr16:75538400-75546000	Weak transcription	Rectal Mucosa Donor 31	rectum
18	chr16:75538400-75550200	Weak transcription	Duodenum Mucosa	Duodenum
19	chr16:75539200-75543400	Enhancers	Hela-S3	cervix
20	chr16:75540400-75543400	Weak transcription	A549	lung
21	chr16:75540400-75550000	Weak transcription	Colonic Mucosa	Colon
22	chr16:75540800-75543400	Weak transcription	NH-A	brain
23	chr16:75540800-75550200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr16:75541000-75543400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr16:75541000-75543400	Weak transcription	Osteobl	bone
26	chr16:75541000-75550200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr16:75541000-75550200	Weak transcription	HSMM	muscle
28	chr16:75541400-75550200	Weak transcription	Rectal Smooth Muscle	rectum
29	chr16:75542000-75543400	Weak transcription	HepG2	liver
30	chr16:75542000-75550200	Weak transcription	Esophagus	oesophagus
31	chr16:75542600-75543400	Enhancers	Fetal Muscle Trunk	muscle
32	chr16:75542600-75544200	Enhancers	Placenta	Placenta
33	chr16:75542600-75549800	Weak transcription	Fetal Muscle Leg	muscle
34	chr16:75542800-75550000	Weak transcription	Skeletal Muscle Female	skeletal muscle
35	chr16:75543000-75544000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr16:75543200-75543400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr16:75543200-75543800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr16:75543200-75543800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr16:75543200-75543800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr16:75543200-75543800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr16:75543200-75543800	Enhancers	Muscle Satellite Cultured Cells	--
42	chr16:75543200-75543800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr16:75543200-75543800	Enhancers	HMEC	breast
44	chr16:75543200-75543800	Enhancers	NHEK	skin
45	chr16:75543200-75544200	Enhancers	K562	blood

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