Variant report
| Variant | rs2657879 |
|---|---|
| Chromosome Location | chr12:56865338-56865339 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:56863000-56865400 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 2 | chr12:56863000-56871200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr12:56863200-56881000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 4 | chr12:56863200-56881200 | Weak transcription | Ovary | ovary |
| 5 | chr12:56863400-56865600 | Strong transcription | NHLF | lung |
| 6 | chr12:56863400-56869400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 7 | chr12:56863400-56873600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 8 | chr12:56863400-56881000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 9 | chr12:56863400-56881200 | Weak transcription | Right Atrium | heart |
| 10 | chr12:56863400-56881400 | Weak transcription | HSMMtube | muscle |
| 11 | chr12:56863600-56865600 | Weak transcription | Brain Angular Gyrus | brain |
| 12 | chr12:56863600-56866600 | Weak transcription | Fetal Kidney | kidney |
| 13 | chr12:56863600-56867800 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 14 | chr12:56863600-56868000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 15 | chr12:56863600-56868000 | Weak transcription | Psoas Muscle | Psoas |
| 16 | chr12:56863600-56868400 | Weak transcription | Right Ventricle | heart |
| 17 | chr12:56863600-56868600 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 18 | chr12:56863600-56869000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 19 | chr12:56863600-56869200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 20 | chr12:56863600-56869600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 21 | chr12:56863600-56870200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 22 | chr12:56863600-56870800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 23 | chr12:56863600-56871000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 24 | chr12:56863600-56874200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 25 | chr12:56863600-56880800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 26 | chr12:56863800-56866400 | Weak transcription | Primary B cells from cord blood | blood |
| 27 | chr12:56863800-56866400 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 28 | chr12:56863800-56867000 | Weak transcription | Brain Hippocampus Middle | brain |
| 29 | chr12:56863800-56867200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 30 | chr12:56863800-56867400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 31 | chr12:56863800-56867600 | Weak transcription | Fetal Brain Male | brain |
| 32 | chr12:56863800-56867600 | Strong transcription | A549 | lung |
| 33 | chr12:56863800-56867600 | Weak transcription | HUVEC | blood vessel |
| 34 | chr12:56863800-56867800 | Strong transcription | HSMM | muscle |
| 35 | chr12:56863800-56868800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 36 | chr12:56863800-56869000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 37 | chr12:56863800-56869400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 38 | chr12:56863800-56869400 | Weak transcription | NHDF-Ad | bronchial |
| 39 | chr12:56863800-56869600 | Weak transcription | Osteobl | bone |
| 40 | chr12:56863800-56870000 | Weak transcription | Placenta | Placenta |
| 41 | chr12:56863800-56870800 | Weak transcription | Adipose Nuclei | Adipose |
| 42 | chr12:56863800-56871400 | Weak transcription | Brain Substantia Nigra | brain |
| 43 | chr12:56863800-56873400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 44 | chr12:56863800-56879000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 45 | chr12:56863800-56880800 | Weak transcription | Brain Germinal Matrix | brain |
| 46 | chr12:56863800-56880800 | Weak transcription | Gastric | stomach |
| 47 | chr12:56863800-56880800 | Weak transcription | HMEC | breast |
| 48 | chr12:56863800-56881000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 49 | chr12:56863800-56881200 | Weak transcription | Colon Smooth Muscle | Colon |
| 50 | chr12:56863800-56881600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
