Variant report
| Variant | rs2657896 |
|---|---|
| Chromosome Location | chr12:56929694-56929695 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:56916800-56930400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr12:56917000-56958000 | Weak transcription | Ovary | ovary |
| 3 | chr12:56917200-56956200 | Weak transcription | Primary T cells from cord blood | blood |
| 4 | chr12:56917200-56959200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 5 | chr12:56917400-56931400 | Weak transcription | Right Ventricle | heart |
| 6 | chr12:56918600-56930000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 7 | chr12:56921200-56930800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 8 | chr12:56921400-56933400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 9 | chr12:56921400-56956200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 10 | chr12:56922000-56933000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 11 | chr12:56922000-56935400 | Weak transcription | Fetal Lung | lung |
| 12 | chr12:56922400-56956200 | Weak transcription | HSMM | muscle |
| 13 | chr12:56922400-56959200 | Weak transcription | Fetal Kidney | kidney |
| 14 | chr12:56923200-56949200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 15 | chr12:56923400-56931200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 16 | chr12:56923600-56930800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 17 | chr12:56923600-56931200 | Weak transcription | Osteobl | bone |
| 18 | chr12:56923600-56933000 | Weak transcription | NHEK | skin |
| 19 | chr12:56923800-56930800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 20 | chr12:56923800-56931000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 21 | chr12:56923800-56931000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 22 | chr12:56923800-56938800 | Weak transcription | HMEC | breast |
| 23 | chr12:56923800-56959400 | Weak transcription | Aorta | Aorta |
| 24 | chr12:56924000-56930400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 25 | chr12:56924200-56930800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 26 | chr12:56924400-56934200 | Weak transcription | Fetal Muscle Leg | muscle |
| 27 | chr12:56924800-56930000 | Weak transcription | Placenta | Placenta |
| 28 | chr12:56924800-56930400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 29 | chr12:56924800-56931000 | Weak transcription | Adipose Nuclei | Adipose |
| 30 | chr12:56924800-56933400 | Weak transcription | HUVEC | blood vessel |
| 31 | chr12:56924800-56959200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 32 | chr12:56925000-56931000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 33 | chr12:56925000-56959200 | Weak transcription | HSMMtube | muscle |
| 34 | chr12:56925200-56930800 | Weak transcription | NHLF | lung |
| 35 | chr12:56925400-56931000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 36 | chr12:56927600-56930800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 37 | chr12:56927600-56934200 | Weak transcription | Fetal Stomach | stomach |
| 38 | chr12:56927600-56946800 | Weak transcription | Left Ventricle | heart |
| 39 | chr12:56928200-56931000 | Weak transcription | Hela-S3 | cervix |
| 40 | chr12:56928200-56932400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 41 | chr12:56928400-56929800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 42 | chr12:56928400-56952400 | Weak transcription | Fetal Intestine Large | intestine |
| 43 | chr12:56929000-56930000 | Weak transcription | A549 | lung |
| 44 | chr12:56929200-56929800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 45 | chr12:56929600-56929800 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 46 | chr12:56929600-56929800 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 47 | chr12:56929600-56931000 | Enhancers | Lung | lung |
