Variant report

Variant rs2666957
Chromosome Location chr6:393868-393869
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:390000-394800 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
2 chr6:390800-394200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
3 chr6:391000-394000 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
4 chr6:391000-394000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
5 chr6:391000-394000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr6:391000-394000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
7 chr6:391000-394200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
8 chr6:391000-394200 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
9 chr6:391000-394200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
10 chr6:391000-394200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr6:391000-394400 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
12 chr6:391200-394000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
13 chr6:391200-394200 Bivalent/Poised TSS Rectal Mucosa Donor 31 rectum
14 chr6:391200-400600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
15 chr6:391400-394000 Active TSS Primary T helper memory cells from peripheral blood 2 blood
16 chr6:391400-394000 Active TSS Primary T killer memory cells from peripheral blood blood
17 chr6:391400-394200 Bivalent/Poised TSS Rectal Smooth Muscle rectum
18 chr6:391800-394000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
19 chr6:391800-394000 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:392000-394200 Bivalent/Poised TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr6:392000-406400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
22 chr6:392200-394200 Flanking Bivalent TSS/Enh Primary mononuclear cells fromperipheralblood Blood
23 chr6:392200-394400 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
24 chr6:392400-394200 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr6:392400-394200 Bivalent Enhancer Fetal Brain Male brain
26 chr6:392600-394200 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
27 chr6:392800-394000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr6:392800-394000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
29 chr6:392800-394000 Bivalent/Poised TSS Brain Cingulate Gyrus brain
30 chr6:392800-394000 Bivalent/Poised TSS Duodenum Mucosa Duodenum
31 chr6:392800-394200 Bivalent Enhancer Fetal Muscle Trunk muscle
32 chr6:392800-396000 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
33 chr6:393000-394200 Bivalent Enhancer Lung lung
34 chr6:393000-394200 Bivalent/Poised TSS Sigmoid Colon Sigmoid Colon
35 chr6:393200-394000 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr6:393200-394000 Active TSS Primary T regulatory cells fromperipheralblood blood
37 chr6:393200-394000 Active TSS Right Atrium heart
38 chr6:393200-394200 Bivalent Enhancer Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr6:393200-394200 Enhancers Pancreas Pancrea
40 chr6:393200-394200 Enhancers Spleen Spleen
41 chr6:393200-394400 Bivalent/Poised TSS Colonic Mucosa Colon
42 chr6:393400-394000 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
43 chr6:393400-394000 Flanking Bivalent TSS/Enh Ganglion Eminence derived primary cultured neurospheres brain
44 chr6:393400-394000 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
45 chr6:393400-394000 Bivalent Enhancer Placenta Placenta
46 chr6:393400-396600 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
47 chr6:393600-394000 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr6:393600-394000 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
49 chr6:393600-394000 Flanking Bivalent TSS/Enh Primary monocytes fromperipheralblood blood
50 chr6:393600-394000 Flanking Bivalent TSS/Enh Brain Angular Gyrus brain

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