Variant report

Variant rs2797307
Chromosome Location chr6:394293-394294
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:390000-394800 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
2 chr6:391000-394400 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
3 chr6:391200-400600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
4 chr6:392000-406400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
5 chr6:392200-394400 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
6 chr6:392800-396000 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
7 chr6:393200-394400 Bivalent/Poised TSS Colonic Mucosa Colon
8 chr6:393400-396600 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
9 chr6:393600-394400 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
10 chr6:393600-394400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
11 chr6:393800-394400 Transcr. at gene 5' and 3' Primary B cells from peripheral blood blood
12 chr6:393800-394400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
13 chr6:393800-394400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
14 chr6:393800-394400 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
15 chr6:393800-396600 Transcr. at gene 5' and 3' GM12878-XiMat blood
16 chr6:393800-397600 Weak transcription Esophagus oesophagus
17 chr6:394000-394400 Flanking Bivalent TSS/Enh Primary T cells from cord blood blood
18 chr6:394000-394400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
19 chr6:394000-394400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
20 chr6:394000-394400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr6:394000-394600 Bivalent Enhancer Primary monocytes fromperipheralblood blood
22 chr6:394000-394600 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
23 chr6:394000-394600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
24 chr6:394000-396400 Enhancers Placenta Amnion Placenta Amnion
25 chr6:394200-394400 Bivalent Enhancer H1 Cell Line embryonic stem cell
26 chr6:394200-394400 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr6:394200-394400 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
28 chr6:394200-394400 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
29 chr6:394200-394400 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
30 chr6:394200-394400 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
31 chr6:394200-394400 Bivalent Enhancer Primary hematopoietic stem cells blood
32 chr6:394200-394400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
33 chr6:394200-394400 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
34 chr6:394200-394400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr6:394200-394400 Bivalent Enhancer Primary mononuclear cells fromperipheralblood Blood
36 chr6:394200-394400 Bivalent Enhancer Brain Hippocampus Middle brain
37 chr6:394200-394400 Bivalent Enhancer Fetal Thymus thymus
38 chr6:394200-395000 Enhancers Primary T killer naive cells fromperipheralblood blood
39 chr6:394200-401400 Weak transcription Spleen Spleen
40 chr6:394200-403400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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