Variant report
| Variant | rs2669560 |
|---|---|
| Chromosome Location | chr12:26192936-26192937 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:26180800-26195000 | Weak transcription | HSMM | muscle |
| 2 | chr12:26181000-26195200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 3 | chr12:26182200-26195800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 4 | chr12:26186000-26200400 | Weak transcription | Right Ventricle | heart |
| 5 | chr12:26186200-26193400 | Weak transcription | Fetal Lung | lung |
| 6 | chr12:26186200-26195000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 7 | chr12:26187000-26193200 | Weak transcription | Esophagus | oesophagus |
| 8 | chr12:26187200-26193200 | Weak transcription | Lung | lung |
| 9 | chr12:26187200-26195800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 10 | chr12:26187200-26196200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 11 | chr12:26187200-26200400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 12 | chr12:26187800-26194800 | Weak transcription | HUVEC | blood vessel |
| 13 | chr12:26188000-26193200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 14 | chr12:26188000-26194600 | Weak transcription | Osteobl | bone |
| 15 | chr12:26188000-26195200 | Weak transcription | Fetal Kidney | kidney |
| 16 | chr12:26188200-26194600 | Weak transcription | NHDF-Ad | bronchial |
| 17 | chr12:26188200-26194800 | Weak transcription | NH-A | brain |
| 18 | chr12:26188800-26194000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 19 | chr12:26189000-26193800 | Enhancers | Fetal Intestine Small | intestine |
| 20 | chr12:26189200-26194800 | Weak transcription | Hela-S3 | cervix |
| 21 | chr12:26190800-26193600 | Enhancers | H1 Cell Line | embryonic stem cell |
| 22 | chr12:26191000-26193200 | Weak transcription | Aorta | Aorta |
| 23 | chr12:26191000-26193200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 24 | chr12:26191000-26193200 | Weak transcription | Pancreas | Pancrea |
| 25 | chr12:26191000-26193600 | Enhancers | Brain Anterior Caudate | brain |
| 26 | chr12:26191000-26195000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 27 | chr12:26191000-26195400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 28 | chr12:26191000-26196000 | Weak transcription | Ovary | ovary |
| 29 | chr12:26191200-26193200 | Weak transcription | Left Ventricle | heart |
| 30 | chr12:26191200-26195000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 31 | chr12:26191200-26195000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 32 | chr12:26191200-26195200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 33 | chr12:26191400-26194600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 34 | chr12:26191400-26195800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 35 | chr12:26191400-26196000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 36 | chr12:26192000-26193000 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 37 | chr12:26192200-26195000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 38 | chr12:26192400-26193600 | Enhancers | Brain Angular Gyrus | brain |
| 39 | chr12:26192400-26193600 | Enhancers | Brain Cingulate Gyrus | brain |
| 40 | chr12:26192400-26193600 | Enhancers | Brain Substantia Nigra | brain |
| 41 | chr12:26192400-26194600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 42 | chr12:26192400-26195000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 43 | chr12:26192400-26195000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 44 | chr12:26192400-26195200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 45 | chr12:26192400-26195200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 46 | chr12:26192400-26195200 | Weak transcription | Colon Smooth Muscle | Colon |
| 47 | chr12:26192400-26195800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 48 | chr12:26192400-26195800 | Weak transcription | Psoas Muscle | Psoas |
| 49 | chr12:26192400-26195800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 50 | chr12:26192400-26195800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
