Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1905516	1.00[AMR][1000 genomes]
rs201195	1.00[AMR][1000 genomes]
rs2249775	1.00[AMR][1000 genomes]
rs2355339	1.00[AMR][1000 genomes]
rs2609009	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2675805	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs388195	1.00[AMR][1000 genomes]
rs414856	1.00[AMR][1000 genomes]
rs4234696	1.00[AMR][1000 genomes]
rs4688706	1.00[AMR][1000 genomes]
rs608961	1.00[AMR][1000 genomes]
rs6446240	0.87[MKK][hapmap];1.00[AMR][1000 genomes]
rs6446241	0.87[MKK][hapmap];1.00[AMR][1000 genomes]
rs6779405	1.00[AMR][1000 genomes]
rs6790086	1.00[AMR][1000 genomes]
rs7371990	1.00[AMR][1000 genomes]
rs7629126	0.88[LWK][hapmap];0.95[MKK][hapmap];0.88[YRI][hapmap];1.00[AMR][1000 genomes]
rs7650776	1.00[AMR][1000 genomes]
rs9851961	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs9854316	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv491647	chr3:50856276-51245158	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:50879400-50885600	Weak transcription	Brain Inferior Temporal Lobe	brain

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