Variant report

Variant rs2688532
Chromosome Location chr3:195537121-195537122
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195528400-195537200 Enhancers ES-I3 Cell Line embryonic stem cell
2 chr3:195530200-195541400 Weak transcription Right Atrium heart
3 chr3:195531000-195537800 Enhancers H1 Cell Line embryonic stem cell
4 chr3:195531400-195537200 Enhancers HUES6 Cell Line embryonic stem cell
5 chr3:195531800-195538400 Weak transcription Fetal Intestine Small intestine
6 chr3:195532400-195538600 Weak transcription Gastric stomach
7 chr3:195532400-195538600 Weak transcription Pancreas Pancrea
8 chr3:195533000-195537600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr3:195533800-195537200 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr3:195534800-195537200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
11 chr3:195534800-195537400 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr3:195534800-195539200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr3:195535000-195538400 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr3:195535600-195537600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr3:195535600-195537800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr3:195535800-195537200 Enhancers Fetal Muscle Leg muscle
17 chr3:195536000-195537400 Enhancers HSMM muscle
18 chr3:195536000-195538000 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
19 chr3:195536000-195539000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
20 chr3:195536200-195537200 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr3:195536200-195538600 Weak transcription Esophagus oesophagus
22 chr3:195536400-195537600 Bivalent Enhancer Fetal Muscle Trunk muscle
23 chr3:195536400-195538800 Active TSS Sigmoid Colon Sigmoid Colon
24 chr3:195536400-195539200 Active TSS Rectal Mucosa Donor 29 rectum
25 chr3:195536400-195542200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr3:195536600-195537200 Bivalent Enhancer Placenta Placenta
27 chr3:195536600-195537600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr3:195536600-195538600 Enhancers HUES64 Cell Line embryonic stem cell
29 chr3:195536600-195538800 Active TSS Rectal Smooth Muscle rectum
30 chr3:195536600-195539000 Active TSS Rectal Mucosa Donor 31 rectum
31 chr3:195536800-195537200 Active TSS Colonic Mucosa Colon
32 chr3:195536800-195537200 Active TSS Placenta Amnion Placenta Amnion
33 chr3:195536800-195538000 Active TSS Small Intestine intestine
34 chr3:195537000-195537600 Weak transcription H9 Cell Line embryonic stem cell

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