Variant report

Variant	rs2691694
Chromosome Location	chr7:83702476-83702477
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10268747	0.82[JPT][hapmap];0.82[AMR][1000 genomes]
rs2107738	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2527038	0.89[CEU][hapmap];0.82[JPT][hapmap];0.89[MEX][hapmap];0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs28837154	0.85[ASN][1000 genomes]
rs6963122	0.82[JPT][hapmap]
rs7781152	0.82[JPT][hapmap]
rs7781923	0.82[JPT][hapmap]
rs7789995	0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv888627	chr7:83659577-83708238	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv888628	chr7:83659577-83722691	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv508464	chr7:83698939-83714150	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2691694	CD36	cis	cerebellum	SCAN

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:83673800-83707600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr7:83689800-83714400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr7:83690600-83714600	Weak transcription	NHDF-Ad	bronchial
4	chr7:83690800-83702800	Weak transcription	NHLF	lung
5	chr7:83691400-83703000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr7:83692000-83702600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr7:83692200-83714600	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr7:83698200-83707600	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr7:83698400-83708200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr7:83698600-83710400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr7:83698600-83715400	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr7:83700200-83702600	Weak transcription	HUVEC	blood vessel
13	chr7:83700600-83702600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr7:83700600-83702800	Weak transcription	Dnd41	blood
15	chr7:83700800-83702600	Weak transcription	A549	lung
16	chr7:83702400-83702800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr7:83702400-83703600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr7:83702400-83703600	Enhancers	Muscle Satellite Cultured Cells	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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