Variant report

Variant	rs2701995
Chromosome Location	chr11:102574323-102574324
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10791590	0.81[ASN][1000 genomes]
rs1276274	0.81[ASN][1000 genomes]
rs1276275	0.81[ASN][1000 genomes]
rs1276285	0.84[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs1296594	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1298740	0.81[ASN][1000 genomes]
rs1300202	0.84[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs1940473	0.80[ASN][1000 genomes]
rs2155555	0.81[ASN][1000 genomes]
rs2464363	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2701992	0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2701993	0.89[ASN][1000 genomes]
rs2846365	0.88[ASN][1000 genomes]
rs2846704	0.89[ASN][1000 genomes]
rs2846705	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2846724	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832252	chr11:102445479-102627879	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv1037454	chr11:102487521-102601233	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv541156	chr11:102487521-102601233	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:102572600-102579800	Weak transcription	Primary neutrophils fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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