The 2.0 version of rSNPBase

Variant report

Variant rs2704580
Chromosome Location chr4:89944447-89944448
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:89903000-89957200 Weak transcription HSMM muscle
2 chr4:89921000-89950600 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr4:89922600-89949800 Weak transcription HMEC breast
4 chr4:89922800-89945600 Weak transcription A549 lung
5 chr4:89923600-89945600 Weak transcription Rectal Smooth Muscle rectum
6 chr4:89926400-89949600 Weak transcription Left Ventricle heart
7 chr4:89926800-89951400 Weak transcription Right Ventricle heart
8 chr4:89931600-89945400 Weak transcription Liver Liver
9 chr4:89933600-89951400 Weak transcription NHLF lung
10 chr4:89933800-89945400 Weak transcription Muscle Satellite Cultured Cells --
11 chr4:89934000-89945000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr4:89936800-89945400 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr4:89937200-89975600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr4:89937400-89945600 Weak transcription Osteobl bone
15 chr4:89938200-89953000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr4:89939600-89951200 Weak transcription NHEK skin
17 chr4:89940000-89945200 Weak transcription Fetal Kidney kidney
18 chr4:89940200-89945000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr4:89940200-89949800 Weak transcription Primary T cells from cord blood blood
20 chr4:89940200-89957800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr4:89940400-89944600 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr4:89940400-89944800 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr4:89940400-89956600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr4:89940400-89956600 Weak transcription NH-A brain
25 chr4:89940400-89957800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr4:89940400-89957800 Weak transcription Aorta Aorta
27 chr4:89940400-89959000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr4:89940400-89961000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr4:89940600-89954400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr4:89940600-89956000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr4:89940600-89956000 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr4:89940600-89957800 Weak transcription H1 Cell Line embryonic stem cell
33 chr4:89940600-89957800 Weak transcription Ovary ovary
34 chr4:89940800-89945600 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr4:89940800-89956800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr4:89941200-89956000 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr4:89941200-89956200 Weak transcription Fetal Lung lung
38 chr4:89941600-89944600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr4:89941800-89945400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr4:89941800-89947800 Weak transcription Fetal Muscle Leg muscle
41 chr4:89941800-89948000 Weak transcription Fetal Muscle Trunk muscle
42 chr4:89941800-89952200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr4:89941800-89952400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr4:89941800-89952600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr4:89941800-89957800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr4:89941800-89957800 Weak transcription Fetal Stomach stomach
47 chr4:89942000-89945400 Weak transcription Stomach Smooth Muscle stomach
48 chr4:89942000-89947800 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr4:89942000-89948600 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr4:89942000-89950000 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015