Variant report

Variant	rs2710268
Chromosome Location	chr12:12005212-12005213
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:12003194..12007907-chr12:12014129..12016810,4	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs2855706	0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832331	chr12:11925095-12114451	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
2	nsv949003	chr12:11938229-12618690	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:11968800-12008200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr12:11975400-12009000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr12:11980400-12006000	Weak transcription	HSMMtube	muscle
4	chr12:11980800-12022600	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr12:11983600-12008200	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr12:11983600-12008200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr12:11983800-12008200	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr12:11985800-12014800	Weak transcription	Fetal Brain Female	brain
9	chr12:11987000-12013000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr12:11987600-12038000	Weak transcription	Hela-S3	cervix
11	chr12:11988200-12006200	Weak transcription	NHDF-Ad	bronchial
12	chr12:11989400-12023000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
13	chr12:11989600-12008200	Weak transcription	HUES48 Cell Line	embryonic stem cell
14	chr12:11989800-12008200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
15	chr12:11992400-12006400	Weak transcription	HMEC	breast
16	chr12:11992400-12008200	Weak transcription	Brain Angular Gyrus	brain
17	chr12:11992400-12008200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr12:11992600-12012600	Weak transcription	Skeletal Muscle Male	skeletal muscle
19	chr12:11992600-12014600	Weak transcription	NHEK	skin
20	chr12:11992600-12015600	Weak transcription	NHLF	lung
21	chr12:11992600-12015800	Weak transcription	Muscle Satellite Cultured Cells	--
22	chr12:11993000-12019000	Weak transcription	A549	lung
23	chr12:11993200-12008200	Weak transcription	Right Ventricle	heart
24	chr12:11993600-12014000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
25	chr12:11994400-12006400	Strong transcription	Monocytes-CD14+_RO01746	blood
26	chr12:11994400-12008400	Weak transcription	Right Atrium	heart
27	chr12:11994400-12009400	Weak transcription	Small Intestine	intestine
28	chr12:11994600-12008200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr12:11994600-12013000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr12:11994800-12006200	Weak transcription	Colonic Mucosa	Colon
31	chr12:11994800-12006600	Weak transcription	Fetal Lung	lung
32	chr12:11994800-12007600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
33	chr12:11995400-12005800	Weak transcription	Fetal Muscle Trunk	muscle
34	chr12:11995400-12006200	Weak transcription	Gastric	stomach
35	chr12:11995400-12008200	Weak transcription	Skeletal Muscle Female	skeletal muscle
36	chr12:11995600-12014000	Weak transcription	Psoas Muscle	Psoas
37	chr12:11996000-12008400	Weak transcription	Stomach Mucosa	stomach
38	chr12:11996400-12006200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
39	chr12:11996400-12022600	Weak transcription	HSMM	muscle
40	chr12:11996600-12008200	Weak transcription	Fetal Kidney	kidney
41	chr12:11997200-12006400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr12:11998400-12006400	Weak transcription	HUVEC	blood vessel
43	chr12:11998600-12007200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
44	chr12:11999600-12007600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
45	chr12:12000200-12008200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
46	chr12:12000400-12005800	Weak transcription	Fetal Muscle Leg	muscle
47	chr12:12000400-12006400	Weak transcription	Primary T helper cells PMA-I stimulated	--
48	chr12:12000600-12006200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr12:12000600-12006200	Weak transcription	NH-A	brain
50	chr12:12000600-12006400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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