Variant report

Variant	rs2748293
Chromosome Location	chr6:107160488-107160489
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11153021	0.80[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs11964238	0.81[ASN][1000 genomes]
rs11966830	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs1884266	0.88[EUR][1000 genomes]
rs2077953	0.88[EUR][1000 genomes]
rs2642463	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2642464	0.88[ASN][1000 genomes]
rs2748291	0.81[AFR][1000 genomes]
rs2748294	0.88[EUR][1000 genomes]
rs2798361	0.88[EUR][1000 genomes]
rs2798362	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2798363	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2798364	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs3117393	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4946780	0.86[ASN][1000 genomes]
rs926925	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:107151000-107162200	Weak transcription	Fetal Kidney	kidney
2	chr6:107152400-107161400	Weak transcription	Pancreas	Pancrea
3	chr6:107158400-107161200	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr6:107158600-107162200	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr6:107158800-107160800	Weak transcription	Primary B cells from peripheral blood	blood
6	chr6:107158800-107163600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr6:107158800-107169200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr6:107160400-107163600	Enhancers	Primary B cells from cord blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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