Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:6199023..6200541-chr6:6218748..6221661,2	K562	blood:
2	chr6:6218041..6220253-chr6:6222273..6223859,2	K562	blood:

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10484323	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12333289	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs17141966	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs3024367	1.00[CHB][hapmap]
rs3024371	1.00[CHB][hapmap]
rs34421073	1.00[ASN][1000 genomes]
rs373695	1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs426158	1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9328347	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs9502428	1.00[ASN][1000 genomes]
rs9504737	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs9504738	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs9504739	1.00[ASN][1000 genomes]
rs9504740	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv883421	chr6:6163492-6574384	Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	nsv883422	chr6:6163492-6769930	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	33 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:6218200-6219200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr6:6218200-6219400	Enhancers	HSMMtube	muscle
3	chr6:6218200-6222200	Strong transcription	Monocytes-CD14+_RO01746	blood
4	chr6:6218400-6219200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:6218400-6219200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr6:6218400-6219200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
7	chr6:6218400-6219200	Enhancers	Adipose Nuclei	Adipose
8	chr6:6218400-6220800	Strong transcription	Primary monocytes fromperipheralblood	blood
9	chr6:6218600-6219000	Enhancers	Skeletal Muscle Male	skeletal muscle
10	chr6:6218600-6219000	Active TSS	A549	lung
11	chr6:6218600-6219200	Flanking Active TSS	HSMM	muscle
12	chr6:6218600-6219600	Enhancers	Right Atrium	heart
13	chr6:6218800-6219000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr6:6218800-6219000	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
15	chr6:6218800-6219200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr6:6218800-6219200	Enhancers	HUES6 Cell Line	embryonic stem cell
17	chr6:6218800-6219200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr6:6218800-6219200	Enhancers	K562	blood
19	chr6:6218800-6219200	Flanking Active TSS	NHDF-Ad	bronchial
20	chr6:6218800-6219400	Enhancers	ES-I3 Cell Line	embryonic stem cell

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