Variant report

Variant	rs2769423
Chromosome Location	chr10:117390995-117390996
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 101 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:101)

rs_ID	r²[population]
rs1005000	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10509992	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs10787584	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10885721	0.90[JPT][hapmap]
rs10885729	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs10885730	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs10885738	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10885750	0.82[ASN][1000 genomes]
rs11197254	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs11197268	0.83[CHB][hapmap];0.81[JPT][hapmap]
rs11197269	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11197282	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11197317	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs11197319	0.82[ASN][1000 genomes]
rs11197320	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs11197321	0.82[ASN][1000 genomes]
rs11197322	0.82[ASN][1000 genomes]
rs11197323	0.82[ASN][1000 genomes]
rs11197324	0.82[ASN][1000 genomes]
rs11197325	0.82[ASN][1000 genomes]
rs11197326	0.82[ASN][1000 genomes]
rs11197337	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs11197342	0.89[ASN][1000 genomes]
rs11197343	0.89[ASN][1000 genomes]
rs11197344	0.89[ASN][1000 genomes]
rs12259533	0.82[ASN][1000 genomes]
rs12259535	0.82[ASN][1000 genomes]
rs12765024	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs1336117	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1410304	0.93[ASN][1000 genomes]
rs1410305	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1536648	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs1572401	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1576144	0.93[ASN][1000 genomes]
rs1576145	0.93[ASN][1000 genomes]
rs1576150	0.89[JPT][hapmap]
rs1581903	0.93[ASN][1000 genomes]
rs1581904	0.94[ASN][1000 genomes]
rs1590733	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs1590734	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs1590736	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs17724227	1.00[CHB][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap]
rs17802400	0.92[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap]
rs1927480	0.93[ASN][1000 genomes]
rs2025912	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2149112	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2250483	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2420096	0.88[ASN][1000 genomes]
rs2420097	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs2420098	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[YRI][hapmap];0.88[ASN][1000 genomes]
rs2769371	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs2769375	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2769378	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap]
rs2769388	0.82[ASN][1000 genomes]
rs2769391	0.82[ASN][1000 genomes]
rs2769392	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2769393	0.82[ASN][1000 genomes]
rs2769394	0.82[ASN][1000 genomes]
rs2769395	0.82[ASN][1000 genomes]
rs2769396	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2769397	0.82[ASN][1000 genomes]
rs2769398	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2769400	0.82[ASN][1000 genomes]
rs2769401	0.82[ASN][1000 genomes]
rs2769403	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2769405	0.82[ASN][1000 genomes]
rs2769406	0.82[ASN][1000 genomes]
rs2769408	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2769409	0.82[ASN][1000 genomes]
rs2769412	0.82[ASN][1000 genomes]
rs2769413	0.82[ASN][1000 genomes]
rs2769415	0.82[ASN][1000 genomes]
rs2769416	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2769418	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs2769421	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2769424	0.93[ASN][1000 genomes]
rs2784811	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2784812	0.92[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs2804184	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2804186	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2804187	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2804192	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs2804197	0.82[ASN][1000 genomes]
rs2804198	0.82[ASN][1000 genomes]
rs2804200	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2804201	0.82[ASN][1000 genomes]
rs2804202	0.82[ASN][1000 genomes]
rs2804204	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2804205	0.82[ASN][1000 genomes]
rs2804206	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2804207	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.95[YRI][hapmap];0.81[ASN][1000 genomes]
rs2804212	0.82[ASN][1000 genomes]
rs2804213	0.82[ASN][1000 genomes]
rs2804214	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2804249	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap]
rs35875963	0.82[ASN][1000 genomes]
rs4612715	0.91[CHB][hapmap];0.89[JPT][hapmap]
rs7068521	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7083621	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7911480	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9420197	1.00[CHB][hapmap];0.90[JPT][hapmap]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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