Variant report

Variant rs2779200
Chromosome Location chr17:15858995-15858996
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:15849600-15860600 Weak transcription Pancreas Pancrea
2 chr17:15850200-15859200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr17:15850200-15860600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr17:15851000-15859600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr17:15851000-15862200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr17:15851200-15861800 Weak transcription NHLF lung
7 chr17:15851200-15869600 Weak transcription Gastric stomach
8 chr17:15851400-15859400 Weak transcription HSMMtube muscle
9 chr17:15851400-15861800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr17:15852000-15859400 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr17:15852000-15860400 Weak transcription Lung lung
12 chr17:15852200-15859200 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr17:15852200-15860600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr17:15852200-15861000 Weak transcription Placenta Amnion Placenta Amnion
15 chr17:15852200-15861800 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr17:15852200-15861800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr17:15852800-15859200 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr17:15853400-15861800 Genic enhancers NHEK skin
19 chr17:15854600-15860600 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr17:15854800-15861000 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr17:15855000-15860000 Weak transcription Esophagus oesophagus
22 chr17:15855200-15859600 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr17:15855400-15861600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr17:15855800-15859200 Weak transcription K562 blood
25 chr17:15855800-15859800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
26 chr17:15855800-15869800 Weak transcription Fetal Intestine Small intestine
27 chr17:15856000-15860800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr17:15856400-15859600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
29 chr17:15856400-15860400 Weak transcription Stomach Mucosa stomach
30 chr17:15856400-15861800 Enhancers NHDF-Ad bronchial
31 chr17:15857200-15860400 Enhancers HMEC breast
32 chr17:15857200-15860600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr17:15857200-15866600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr17:15857400-15859000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr17:15857600-15859400 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr17:15857800-15861800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr17:15858000-15859200 Weak transcription Primary monocytes fromperipheralblood blood
38 chr17:15858000-15861800 Weak transcription Placenta Placenta
39 chr17:15858000-15868200 Weak transcription Fetal Muscle Trunk muscle
40 chr17:15858200-15859200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr17:15858200-15859400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr17:15858200-15859400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr17:15858200-15859800 Enhancers HepG2 liver
44 chr17:15858200-15861800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr17:15858400-15859200 Weak transcription HSMM muscle
46 chr17:15858400-15859400 Weak transcription NH-A brain
47 chr17:15858600-15859600 Weak transcription HUVEC blood vessel
48 chr17:15858800-15859200 Weak transcription Muscle Satellite Cultured Cells --
49 chr17:15858800-15859200 Weak transcription A549 lung
50 chr17:15858800-15859200 Weak transcription Hela-S3 cervix

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