Variant report

Variant	rs2782590
Chromosome Location	chr1:145385572-145385573
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:61)
Chromatin interactive
region (count:16)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:145385524-145385574	SK-N-SH	brain:	n/a
2	chr1:145385524-145385574	ovcar-3	ovarian:	n/a
3	chr1:145385524-145385574	MCF-7	breast:	n/a
4	chr1:145385524-145385574	HCM	heart:	n/a
5	chr1:145385524-145385574	HIPEpiC	eye:	n/a
6	chr1:145385524-145385574	AG09319	gingival:	n/a
7	chr1:145385524-145385574	SAEC	small airway:	n/a
8	chr1:145385524-145385574	PANC-1	pancreas:	n/a
9	chr1:145385524-145385574	HUVEC	blood vessel:	n/a
10	chr1:145385524-145385574	GM19239	blood:	n/a
11	chr1:145385524-145385574	AG04450	lung:	fetal
12	chr1:145385524-145385574	PrEC	prostate:	n/a
13	chr1:145385524-145385574	SKMC	muscle:	n/a
14	chr1:145385524-145385574	A549	lung:	n/a
15	chr1:145385524-145385574	MCF10A-Er-Src	breast:	n/a
16	chr1:145385524-145385574	PFSK-1	brain:	n/a
17	chr1:145385524-145385574	HAEpiC	amniotic membrane:	n/a
18	chr1:145385524-145385574	HEEpiC	esophagus:	n/a
19	chr1:145385524-145385574	NHBE	bronchial:	n/a
20	chr1:145385524-145385574	GM12892	blood:	n/a
21	chr1:145385524-145385574	GM06990	blood:	n/a
22	chr1:145385524-145385574	NB4	blood:	n/a
23	chr1:145385524-145385574	K562	blood:	n/a
24	chr1:145385524-145385574	AG09309	skin:	n/a
25	chr1:145385524-145385574	HCT-116	colon:	n/a
26	chr1:145385524-145385574	U87	brain:	n/a
27	chr1:145385524-145385574	NHDF-neo	bronchial:	n/a
28	chr1:145385524-145385574	HPAEpiC	pulmonary alveolar:	n/a
29	chr1:145385524-145385574	AoSMC	blood vessel:	n/a
30	chr1:145385524-145385574	ECC-1	luminal epithelium:	n/a
31	chr1:145385524-145385574	T-47D	breast:	n/a
32	chr1:145385524-145385574	H1-hESC	embryonic stem cell:	embryo
33	chr1:145385524-145385574	ProgFib	skin:	n/a
34	chr1:145385524-145385574	CMK	blood:	n/a
35	chr1:145385524-145385574	HRPEpiC	eye:	n/a
36	chr1:145385524-145385574	HepG2	liver:	n/a
37	chr1:145385524-145385574	HEK293	kidney:	embryo
38	chr1:145385524-145385574	RPTEC	kidney:	n/a
39	chr1:145385524-145385574	LNCaP	prostate:	n/a
40	chr1:145385524-145385574	HCF	heart:	n/a
41	chr1:145385524-145385574	BE2_C	brain:	n/a
42	chr1:145385524-145385574	HL-60	blood:	n/a
43	chr1:145385524-145385574	Jurkat	blood:	n/a
44	chr1:145385524-145385574	HMEC	breast:	n/a
45	chr1:145385524-145385574	Caco-2	colon:	n/a
46	chr1:145385524-145385574	SK-N-MC	brain:	n/a
47	chr1:145385524-145385574	GM12878	blood:	n/a
48	chr1:145385524-145385574	IMR90	lung:	fetal
49	chr1:145385524-145385574	SK-N-SH_RA	brain:	n/a
50	chr1:145385524-145385574	Hepatocyte	liver:	n/a

(count:16 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:145380937..145386297-chr1:145506337..145510366,6	MCF-7	breast:
2	chr1:145381529..145386275-chr1:145468516..145473558,10	K562	blood:
3	chr1:145382892..145385742-chr1:145548741..145550331,2	MCF-7	breast:
4	chr1:145384768..145387512-chr1:145459868..145462045,2	K562	blood:
5	chr1:145384844..145386862-chr1:145432023..145434289,2	MCF-7	breast:
6	chr1:144996607..145000491-chr1:145382842..145385780,3	K562	blood:
7	chr1:145384460..145386634-chr1:145411636..145413238,2	K562	blood:
8	chr1:144995928..144998719-chr1:145383813..145386385,2	K562	blood:
9	chr1:145382523..145385731-chr1:145573512..145577753,6	K562	blood:
10	chr1:145381438..145386194-chr1:145434088..145442772,20	K562	blood:
11	chr1:145381396..145385731-chr1:145572430..145577753,7	K562	blood:
12	chr1:145384477..145386792-chr6:26019510..26022306,2	MCF-7	breast:
13	chr1:145381258..145386194-chr1:145434301..145446043,20	K562	blood:
14	chr1:145381407..145386634-chr1:145407625..145413975,7	K562	blood:
15	chr1:145036819..145040211-chr1:145382559..145385935,4	MCF-7	breast:
16	chr1:145384182..145385791-chr4:37568885..37571200,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000233396	CpG island
ENSG00000198366	Chromatin interaction
ENSG00000196176	Chromatin interaction
ENSG00000117289	Chromatin interaction
ENSG00000198483	Chromatin interaction
ENSG00000131788	Chromatin interaction
ENSG00000168509	Chromatin interaction
ENSG00000131795	Chromatin interaction
ENSG00000181039	Chromatin interaction
ENSG00000121851	Chromatin interaction
ENSG00000178104	Chromatin interaction
ENSG00000234222	Chromatin interaction

Extended variants
information (count: 69 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10732969	1.00[AMR][1000 genomes]
rs10910818	1.00[EUR][1000 genomes]
rs12083119	1.00[EUR][1000 genomes]
rs12084641	1.00[EUR][1000 genomes]
rs12084691	1.00[EUR][1000 genomes]
rs1328584	1.00[AMR][1000 genomes]
rs1475470	1.00[AMR][1000 genomes]
rs1983954	1.00[AMR][1000 genomes]
rs2031370	1.00[EUR][1000 genomes]
rs3121126	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3754338	1.00[EUR][1000 genomes]
rs3754340	1.00[EUR][1000 genomes]
rs4384171	1.00[AMR][1000 genomes]
rs4546873	1.00[AMR][1000 genomes]
rs56887108	1.00[EUR][1000 genomes]
rs61814553	1.00[AMR][1000 genomes]
rs6424355	1.00[AMR][1000 genomes]
rs6658276	1.00[EUR][1000 genomes]
rs6694055	1.00[EUR][1000 genomes]
rs72633607	1.00[AMR][1000 genomes]
rs73004698	1.00[EUR][1000 genomes]
rs73006804	1.00[EUR][1000 genomes]
rs73006805	1.00[EUR][1000 genomes]
rs7552087	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs833942	1.00[AMR][1000 genomes]
rs863850	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9424751	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9424930	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:41 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1005055	chr1:144893406-145792052	Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	381 gene(s)	inside rSNPs	diseases
2	esv1822839	chr1:144902232-145393578	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
3	esv1826561	chr1:144902232-145393578	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
4	esv1849727	chr1:144902232-145393578	Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
5	nsv1003688	chr1:144949963-145398179	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	257 gene(s)	inside rSNPs	diseases
6	nsv432720	chr1:144956393-145727683	Enhancers Genic enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	363 gene(s)	inside rSNPs	diseases
7	nsv998771	chr1:144986365-145687024	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	362 gene(s)	inside rSNPs	diseases
8	nsv535079	chr1:144986365-145687024	Weak transcription Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	362 gene(s)	inside rSNPs	diseases
9	nsv933296	chr1:144994945-145740657	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	359 gene(s)	inside rSNPs	diseases
10	nsv427752	chr1:145057218-145483353	Weak transcription Enhancers Bivalent Enhancer Active TSS Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	307 gene(s)	inside rSNPs	diseases
11	nsv1000082	chr1:145081821-145687024	Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	347 gene(s)	inside rSNPs	diseases
12	nsv535081	chr1:145081821-145687024	Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	347 gene(s)	inside rSNPs	diseases
13	esv1824820	chr1:145086810-145393578	Weak transcription Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	233 gene(s)	inside rSNPs	diseases
14	nsv998789	chr1:145100386-145406787	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	226 gene(s)	inside rSNPs	diseases
15	nsv1013638	chr1:145172973-146012524	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	339 gene(s)	inside rSNPs	diseases
16	esv1828621	chr1:145176656-145393578	Weak transcription Strong transcription Flanking Bivalent TSS/Enh Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	215 gene(s)	inside rSNPs	diseases
17	nsv831337	chr1:145189320-145393470	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	215 gene(s)	inside rSNPs	diseases
18	esv1816073	chr1:145197749-145388977	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	215 gene(s)	inside rSNPs	diseases
19	esv2422428	chr1:145259792-145609308	Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	308 gene(s)	inside rSNPs	diseases
20	nsv2677	chr1:145260675-145392668	ZNF genes & repeats Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	211 gene(s)	inside rSNPs	diseases
21	nsv1002731	chr1:145276259-145792052	Weak transcription Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	327 gene(s)	inside rSNPs	diseases
22	nsv508582	chr1:145285203-145387361	Weak transcription Enhancers Genic enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	211 gene(s)	inside rSNPs	diseases
23	nsv831359	chr1:145290956-145451472	Strong transcription Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	248 gene(s)	inside rSNPs	diseases
24	nsv532247	chr1:145291698-146037042	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	335 gene(s)	inside rSNPs	diseases
25	esv1804782	chr1:145292223-145387936	Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	211 gene(s)	inside rSNPs	diseases
26	esv1805421	chr1:145293280-145385586	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	211 gene(s)	inside rSNPs	diseases
27	nsv433348	chr1:145294531-145385675	Strong transcription Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	211 gene(s)	inside rSNPs	diseases
28	nsv872223	chr1:145294531-145394955	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	211 gene(s)	inside rSNPs	diseases
29	nsv532393	chr1:145304668-145738275	Flanking Active TSS Strong transcription Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	325 gene(s)	inside rSNPs	diseases
30	nsv511125	chr1:145310197-145394955	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	210 gene(s)	inside rSNPs	diseases
31	nsv532248	chr1:145310253-145899398	Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	329 gene(s)	inside rSNPs	diseases
32	nsv872224	chr1:145341400-145900678	Enhancers Genic enhancers Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	329 gene(s)	inside rSNPs	diseases
33	nsv948894	chr1:145366695-145727683	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	323 gene(s)	inside rSNPs	diseases
34	nsv432731	chr1:145366956-145727956	Genic enhancers Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	323 gene(s)	inside rSNPs	diseases
35	nsv872225	chr1:145367196-145900678	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	329 gene(s)	inside rSNPs	diseases
36	nsv918206	chr1:145372550-145792052	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	326 gene(s)	inside rSNPs	diseases
37	nsv918131	chr1:145372550-146012524	Enhancers Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
38	nsv1007296	chr1:145372551-145792052	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	326 gene(s)	inside rSNPs	diseases
39	nsv917908	chr1:145372551-145932457	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	329 gene(s)	inside rSNPs	diseases
40	esv2761653	chr1:145382124-145932468	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	329 gene(s)	inside rSNPs	diseases
41	nsv547654	chr1:145384225-145747463	Weak transcription Genic enhancers Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	163 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:145382800-145390000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr1:145383200-145385800	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr1:145383200-145385800	Weak transcription	Primary T helper cells PMA-I stimulated	--
4	chr1:145383400-145385600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr1:145383400-145385600	Weak transcription	Osteobl	bone
6	chr1:145383400-145385800	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr1:145383400-145385800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr1:145383400-145385800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr1:145383400-145386000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
10	chr1:145383400-145395200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr1:145384000-145385600	Weak transcription	Primary monocytes fromperipheralblood	blood
12	chr1:145384000-145385800	Weak transcription	Primary T cells fromperipheralblood	blood
13	chr1:145384000-145385800	Weak transcription	Dnd41	blood
14	chr1:145384000-145386000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr1:145384000-145386000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr1:145384000-145387800	Weak transcription	K562	blood
17	chr1:145384400-145385600	Weak transcription	Hela-S3	cervix
18	chr1:145384800-145386400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr1:145385000-145386200	Enhancers	A549	lung
20	chr1:145385000-145386600	Enhancers	Liver	Liver
21	chr1:145385000-145392200	Enhancers	HepG2	liver
22	chr1:145385200-145385800	Weak transcription	Primary B cells from cord blood	blood
23	chr1:145385200-145385800	Enhancers	Lung	lung
24	chr1:145385200-145386400	Enhancers	Placenta	Placenta
25	chr1:145385400-145385800	Enhancers	HUES6 Cell Line	embryonic stem cell
26	chr1:145385400-145385800	Enhancers	Fetal Thymus	thymus
27	chr1:145385400-145388000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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