The 2.0 version of rSNPBase

Variant report

Variant rs2786543
Chromosome Location chr1:98036617-98036618
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:97976600-98054200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr1:97976800-98051400 Weak transcription Left Ventricle heart
3 chr1:97996000-98037400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:97998600-98063800 Weak transcription Right Ventricle heart
5 chr1:97999400-98064600 Weak transcription Psoas Muscle Psoas
6 chr1:97999400-98074000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:98001200-98062400 Weak transcription Fetal Lung lung
8 chr1:98002000-98054600 Weak transcription Lung lung
9 chr1:98002000-98069400 Weak transcription Muscle Satellite Cultured Cells --
10 chr1:98002800-98058800 Weak transcription Gastric stomach
11 chr1:98004400-98058400 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr1:98006400-98040600 Weak transcription Pancreas Pancrea
13 chr1:98007800-98058400 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr1:98007800-98075800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:98009800-98076800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr1:98009800-98112200 Weak transcription HSMM muscle
17 chr1:98012000-98054200 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr1:98013400-98048600 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr1:98013600-98058800 Weak transcription Esophagus oesophagus
20 chr1:98015200-98038000 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr1:98015200-98040200 Weak transcription HSMMtube muscle
22 chr1:98015200-98047000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:98015200-98054000 Weak transcription Adipose Nuclei Adipose
24 chr1:98015200-98058600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr1:98015200-98062000 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr1:98015400-98038800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:98015600-98058600 Weak transcription Osteobl bone
28 chr1:98018400-98040400 Weak transcription Small Intestine intestine
29 chr1:98020000-98059000 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr1:98020000-98060600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr1:98023200-98041000 Strong transcription Primary monocytes fromperipheralblood blood
32 chr1:98023200-98045400 Weak transcription Fetal Intestine Small intestine
33 chr1:98023800-98037200 Weak transcription Primary T cells fromperipheralblood blood
34 chr1:98023800-98053000 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr1:98024400-98038000 Weak transcription Dnd41 blood
36 chr1:98024400-98039200 Weak transcription Primary T cells from cord blood blood
37 chr1:98025200-98046600 Weak transcription Thymus Thymus
38 chr1:98026000-98051400 Weak transcription Primary hematopoietic stem cells blood
39 chr1:98026600-98039400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:98026600-98051200 Weak transcription Primary B cells from cord blood blood
41 chr1:98028000-98039200 Weak transcription NHLF lung
42 chr1:98028800-98054200 Weak transcription Ovary ovary
43 chr1:98033000-98039600 Strong transcription Liver Liver
44 chr1:98033200-98039000 Weak transcription Duodenum Mucosa Duodenum
45 chr1:98034200-98047000 Weak transcription H9 Cell Line embryonic stem cell
46 chr1:98034600-98037000 Strong transcription Primary T regulatory cells fromperipheralblood blood
47 chr1:98035200-98039600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr1:98035400-98039800 Strong transcription Primary T helper cells fromperipheralblood blood
49 chr1:98036400-98037200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
50 chr1:98036400-98037600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015