The 2.0 version of rSNPBase

Variant report

Variant rs2787527
Chromosome Location chr6:106687869-106687870
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:106645800-106695400 Weak transcription Primary T helper naive cells fromperipheralblood blood
2 chr6:106647400-106695200 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr6:106649200-106695200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr6:106649200-106695400 Weak transcription HMEC breast
5 chr6:106650000-106695200 Weak transcription NHEK skin
6 chr6:106658200-106689000 Weak transcription Primary B cells from peripheral blood blood
7 chr6:106664800-106693800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr6:106665400-106689600 Weak transcription Aorta Aorta
9 chr6:106665400-106695200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr6:106671200-106690000 Weak transcription GM12878-XiMat blood
11 chr6:106671600-106693800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr6:106671600-106724400 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr6:106673800-106691000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr6:106674800-106689600 Weak transcription HSMM muscle
15 chr6:106675000-106695600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr6:106675400-106695600 Weak transcription Fetal Intestine Large intestine
17 chr6:106675400-106698800 Weak transcription Pancreas Pancrea
18 chr6:106675400-106705000 Weak transcription K562 blood
19 chr6:106675600-106696800 Weak transcription Fetal Lung lung
20 chr6:106676000-106695400 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr6:106676400-106689200 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr6:106676400-106689400 Weak transcription Duodenum Mucosa Duodenum
23 chr6:106676400-106739200 Weak transcription Small Intestine intestine
24 chr6:106676800-106695400 Weak transcription Thymus Thymus
25 chr6:106676800-106698800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr6:106677000-106695400 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr6:106677000-106699600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr6:106677400-106689400 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr6:106677600-106713000 Weak transcription Brain Inferior Temporal Lobe brain
30 chr6:106680800-106695000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr6:106682200-106695200 Weak transcription H1 Cell Line embryonic stem cell
32 chr6:106682200-106695200 Weak transcription Hela-S3 cervix
33 chr6:106683000-106694400 Weak transcription Placenta Placenta
34 chr6:106683000-106694600 Weak transcription Fetal Thymus thymus
35 chr6:106683000-106695200 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr6:106683200-106695400 Weak transcription Primary T cells fromperipheralblood blood
37 chr6:106683400-106689600 Weak transcription Lung lung
38 chr6:106683400-106694000 Weak transcription Osteobl bone
39 chr6:106683400-106695200 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr6:106683400-106695200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr6:106683400-106710000 Weak transcription Fetal Stomach stomach
42 chr6:106683400-106716600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr6:106684000-106689600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr6:106684000-106690000 Weak transcription Fetal Intestine Small intestine
45 chr6:106684000-106694000 Weak transcription NHDF-Ad bronchial
46 chr6:106684000-106695000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr6:106684000-106695000 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr6:106684000-106695000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr6:106684000-106710600 Weak transcription Fetal Muscle Leg muscle
50 chr6:106684000-106710800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015