Variant report

Variant	rs2789723
Chromosome Location	chr1:216978635-216978636
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10863287	1.00[CEU][hapmap]
rs11572723	1.00[ASN][1000 genomes]
rs11577585	1.00[ASN][1000 genomes]
rs1498284	1.00[ASN][1000 genomes]
rs17671115	1.00[ASN][1000 genomes]
rs1976331	1.00[ASN][1000 genomes]
rs2152472	1.00[ASN][1000 genomes]
rs2789727	1.00[ASN][1000 genomes]
rs2789728	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2813662	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55950540	1.00[ASN][1000 genomes]
rs6700612	1.00[ASN][1000 genomes]
rs74141707	1.00[ASN][1000 genomes]
rs945452	1.00[ASN][1000 genomes]

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216976000-216979000	Active TSS	Skeletal Muscle Male	skeletal muscle
2	chr1:216976800-216979000	Active TSS	Psoas Muscle	Psoas
3	chr1:216977200-216978800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr1:216977200-216978800	Enhancers	Fetal Heart	heart
5	chr1:216977200-216980000	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr1:216977200-216980200	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr1:216977400-216978800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr1:216977400-216979400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr1:216977400-216980200	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr1:216978000-216979800	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr1:216978200-216979000	Active TSS	Brain Hippocampus Middle	brain
12	chr1:216978400-216978800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
13	chr1:216978400-216979000	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr1:216978400-216979000	Active TSS	Brain Inferior Temporal Lobe	brain
15	chr1:216978400-216979000	Active TSS	Brain Substantia Nigra	brain
16	chr1:216978400-216979000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
17	chr1:216978400-216979200	Active TSS	Brain Cingulate Gyrus	brain
18	chr1:216978400-216979400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr1:216978400-216979400	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr1:216978400-216979600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr1:216978600-216978800	Enhancers	NHEK	skin
22	chr1:216978600-216979000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr1:216978600-216979000	Enhancers	Muscle Satellite Cultured Cells	--
24	chr1:216978600-216979000	Active TSS	Brain Angular Gyrus	brain
25	chr1:216978600-216979000	Enhancers	HSMMtube	muscle
26	chr1:216978600-216979200	Flanking Active TSS	Brain Anterior Caudate	brain
27	chr1:216978600-216979400	Enhancers	ES-I3 Cell Line	embryonic stem cell
28	chr1:216978600-216979600	Enhancers	H1 Cell Line	embryonic stem cell
29	chr1:216978600-216979600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr1:216978600-216979600	Enhancers	H9 Cell Line	embryonic stem cell
31	chr1:216978600-216980200	Enhancers	Fetal Muscle Leg	muscle
32	chr1:216978600-216980400	Enhancers	iPS-15b Cell Line	embryonic stem cell

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