The 2.0 version of rSNPBase

Variant report

Variant rs2802101
Chromosome Location chr1:95186641-95186642
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95152800-95195000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr1:95168200-95200400 Weak transcription Pancreas Pancrea
3 chr1:95169400-95200400 Weak transcription Colonic Mucosa Colon
4 chr1:95173400-95200600 Weak transcription Right Atrium heart
5 chr1:95175800-95192600 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr1:95175800-95193000 Weak transcription Fetal Stomach stomach
7 chr1:95176200-95189200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:95179600-95193800 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr1:95180000-95188400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:95180000-95189200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:95180200-95189000 Weak transcription Fetal Intestine Large intestine
12 chr1:95180200-95189600 Weak transcription NHDF-Ad bronchial
13 chr1:95181400-95189400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:95182600-95191000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:95183000-95189200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:95184000-95188800 Strong transcription Fetal Intestine Small intestine
17 chr1:95184400-95190000 Enhancers Primary hematopoietic stem cells short term culture blood
18 chr1:95184400-95190800 Enhancers Primary monocytes fromperipheralblood blood
19 chr1:95185000-95190400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr1:95185400-95188000 Enhancers Spleen Spleen
21 chr1:95185400-95190000 Enhancers Primary hematopoietic stem cells blood
22 chr1:95185600-95187800 Enhancers Primary B cells from peripheral blood blood
23 chr1:95185800-95187200 Flanking Active TSS Primary B cells from cord blood blood
24 chr1:95185800-95187400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
25 chr1:95186000-95188000 Enhancers Fetal Thymus thymus
26 chr1:95186000-95188000 Enhancers Dnd41 blood
27 chr1:95186200-95188800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:95186200-95211400 Weak transcription Gastric stomach
29 chr1:95186400-95186800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
30 chr1:95186400-95187000 Enhancers Sigmoid Colon Sigmoid Colon
31 chr1:95186600-95187000 Flanking Active TSS GM12878-XiMat blood
32 chr1:95186600-95187400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015