The 2.0 version of rSNPBase

Variant report

Variant rs2808392
Chromosome Location chr1:212135135-212135136
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212106200-212148600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr1:212106400-212147800 Weak transcription NH-A brain
3 chr1:212112000-212170200 Weak transcription Small Intestine intestine
4 chr1:212112400-212148600 Weak transcription NHDF-Ad bronchial
5 chr1:212112600-212148200 Weak transcription Colon Smooth Muscle Colon
6 chr1:212112800-212202000 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr1:212113600-212138600 Weak transcription Fetal Kidney kidney
8 chr1:212113600-212151600 Weak transcription Psoas Muscle Psoas
9 chr1:212113600-212170200 Weak transcription Fetal Brain Male brain
10 chr1:212114200-212185800 Weak transcription Brain Angular Gyrus brain
11 chr1:212115400-212138800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:212115800-212144000 Weak transcription Adipose Nuclei Adipose
13 chr1:212115800-212151600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:212117000-212139600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr1:212118400-212139000 Weak transcription Osteobl bone
16 chr1:212118600-212141800 Weak transcription HSMM muscle
17 chr1:212118600-212149000 Weak transcription Fetal Heart heart
18 chr1:212121800-212138000 Weak transcription HSMMtube muscle
19 chr1:212123400-212152600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr1:212123600-212159200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:212123800-212198200 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:212124000-212138600 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr1:212124000-212139800 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr1:212124000-212140600 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr1:212125400-212149000 Weak transcription Aorta Aorta
26 chr1:212125400-212170400 Weak transcription Brain Anterior Caudate brain
27 chr1:212125600-212159200 Weak transcription Muscle Satellite Cultured Cells --
28 chr1:212125600-212160000 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr1:212125800-212148200 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr1:212126000-212157000 Weak transcription HUVEC blood vessel
31 chr1:212126200-212139400 Weak transcription HMEC breast
32 chr1:212126600-212148800 Weak transcription NHEK skin
33 chr1:212128800-212137000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:212129000-212136000 Strong transcription Fetal Thymus thymus
35 chr1:212129000-212167800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:212129400-212204000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr1:212130000-212135600 Strong transcription Dnd41 blood
38 chr1:212130000-212157600 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr1:212130400-212136200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr1:212130600-212135400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr1:212131800-212136800 Strong transcription Primary B cells from peripheral blood blood
42 chr1:212131800-212142400 Strong transcription Primary hematopoietic stem cells blood
43 chr1:212132000-212135600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr1:212132400-212135600 Strong transcription Primary T cells from cord blood blood
45 chr1:212133200-212138800 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr1:212133200-212148200 Weak transcription Rectal Smooth Muscle rectum
47 chr1:212133200-212152600 Weak transcription H9 Cell Line embryonic stem cell
48 chr1:212133200-212170600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr1:212133400-212138600 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr1:212133400-212147800 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015