Variant report

Variant	rs2810491
Chromosome Location	chr9:136923331-136923332
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:36)
CpG islands
(count:0)
Chromatin interactive
region (count:5)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:36 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr9:136923271-136923652	HepG2	liver:	n/a	n/a
2	FOSL2	chr9:136923287-136923782	HepG2	liver:	n/a	n/a
3	NR3C1	chr9:136923083-136923591	A549	lung:	n/a	n/a
4	POLR2A	chr9:136923218-136923632	HepG2	liver:	n/a	n/a
5	POLR2A	chr9:136923311-136923484	H1-hESC	embryonic stem cell:	n/a	n/a
6	NR3C1	chr9:136923154-136923626	A549	lung:	n/a	n/a
7	HNF4A	chr9:136923327-136923653	HepG2	liver:	n/a	n/a
8	CEBPD	chr9:136923202-136923650	HepG2	liver:	n/a	n/a
9	FOXA2	chr9:136922953-136924042	HepG2	liver:	n/a	n/a
10	NR3C1	chr9:136923053-136923609	A549	lung:	n/a	n/a
11	FOXA1	chr9:136923295-136923917	HepG2	liver:	n/a	n/a
12	POLR2A	chr9:136922994-136923751	Hela-S3	cervix:	n/a	n/a
13	FOXA1	chr9:136923244-136923903	HepG2	liver:	n/a	n/a
14	MXI1	chr9:136923253-136923707	HepG2	liver:	n/a	n/a
15	MYC	chr9:136923292-136923702	HepG2	liver:	n/a	n/a
16	EP300	chr9:136923309-136923760	HepG2	liver:	n/a	n/a
17	CEBPB	chr9:136923255-136923684	HepG2	liver:	n/a	n/a
18	NR3C1	chr9:136923191-136923468	A549	lung:	n/a	n/a
19	USF1	chr9:136923323-136923639	HepG2	liver:	n/a	n/a
20	YY1	chr9:136923137-136923757	HepG2	liver:	n/a	n/a
21	MBD4	chr9:136923262-136923706	HepG2	liver:	n/a	n/a
22	MAX	chr9:136922907-136923872	HepG2	liver:	n/a	n/a
23	CEBPB	chr9:136923283-136923648	HepG2	liver:	n/a	n/a
24	CEBPB	chr9:136923303-136923594	HepG2	liver:	n/a	n/a
25	MYBL2	chr9:136923267-136923800	HepG2	liver:	n/a	n/a
26	SP1	chr9:136923205-136923793	HepG2	liver:	n/a	n/a
27	FOXA1	chr9:136923311-136923848	HepG2	liver:	n/a	n/a
28	RXRA	chr9:136923303-136923679	HepG2	liver:	n/a	n/a
29	FOXA1	chr9:136923243-136923880	HepG2	liver:	n/a	n/a
30	MAX	chr9:136923024-136923942	HepG2	liver:	n/a	n/a
31	MYBL2	chr9:136923159-136923682	HepG2	liver:	n/a	n/a
32	FOXA2	chr9:136923286-136923729	A549	lung:	n/a	n/a
33	MAX	chr9:136923222-136923672	HepG2	liver:	n/a	n/a
34	JUND	chr9:136923300-136923745	HepG2	liver:	n/a	n/a
35	POLR2A	chr9:136923001-136923604	SK-N-MC	brain:	n/a	n/a
36	YY1	chr9:136923294-136923797	HepG2	liver:	n/a	n/a

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:136907649..136910624-chr9:136921373..136924685,3	K562	blood:
2	chr9:136914230..136916308-chr9:136922322..136925797,3	K562	blood:
3	chr9:136556489..136558847-chr9:136922082..136923657,2	K562	blood:
4	chr9:136913831..136916056-chr9:136922340..136924397,3	MCF-7	breast:
5	chr9:136905250..136907421-chr9:136923049..136925232,2	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-WDR5-1	chr9:136922084-136923927	ENSG00000235138.1
2	lnc-WDR5-1	chr9:136922084-136924173	NONHSAT135373
3	lnc-WDR5-1	chr9:136922084-136924173	NONHSAT135371

No data

Variant related genes	Relation type
BRD3	TF binding region
ENSG00000169925	Chromatin interaction

Extended variants
information (count: 95 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:68)

rs_ID	r²[population]
rs1079524	0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs109536	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10993894	0.81[EUR][1000 genomes]
rs10993895	0.91[CEU][hapmap];0.84[CHB][hapmap];0.90[CHD][hapmap];0.91[JPT][hapmap];0.88[TSI][hapmap];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1124317	0.94[CHB][hapmap];0.88[CHD][hapmap];0.91[JPT][hapmap];0.93[ASN][1000 genomes]
rs2073818	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.89[GIH][hapmap];0.91[JPT][hapmap];0.85[MEX][hapmap];0.91[TSI][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2106223	0.91[JPT][hapmap]
rs2157770	0.94[CHB][hapmap];0.94[JPT][hapmap];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2427946	0.88[ASN][1000 genomes]
rs2427949	0.89[ASN][1000 genomes]
rs2427951	0.89[ASN][1000 genomes]
rs2427977	0.84[ASN][1000 genomes]
rs2506696	0.80[ASN][1000 genomes]
rs2506699	0.88[ASN][1000 genomes]
rs2506700	0.88[ASN][1000 genomes]
rs2506703	0.82[ASN][1000 genomes]
rs2506712	0.82[ASN][1000 genomes]
rs2506713	0.85[ASN][1000 genomes]
rs2506714	0.85[ASN][1000 genomes]
rs2519078	0.94[CHB][hapmap];0.91[JPT][hapmap];0.84[ASN][1000 genomes]
rs2519080	0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs2519081	0.94[CHB][hapmap];0.91[JPT][hapmap];0.93[ASN][1000 genomes]
rs2519831	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2520094	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.87[GIH][hapmap];0.91[JPT][hapmap];0.95[MEX][hapmap];0.88[TSI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2520095	0.95[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2520096	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2520099	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2810480	0.87[ASN][1000 genomes]
rs2810489	1.00[CEU][hapmap];0.89[CHB][hapmap];0.88[CHD][hapmap];0.82[JPT][hapmap];0.91[TSI][hapmap];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2810490	0.83[CEU][hapmap];0.81[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2905064	0.82[ASN][1000 genomes]
rs3004622	0.85[ASN][1000 genomes]
rs3004624	0.82[ASN][1000 genomes]
rs3004626	0.82[ASN][1000 genomes]
rs3094339	0.81[EUR][1000 genomes]
rs378740	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs379417	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs379471	0.82[EUR][1000 genomes]
rs386770	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs392134	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs401826	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs408307	1.00[CEU][hapmap];0.84[CHB][hapmap];0.93[CHD][hapmap];0.91[JPT][hapmap];0.88[TSI][hapmap];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs410876	1.00[CEU][hapmap];0.84[CHB][hapmap];0.92[CHD][hapmap];0.86[JPT][hapmap];0.85[TSI][hapmap];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs416390	1.00[CEU][hapmap];0.84[CHB][hapmap];0.92[CHD][hapmap];0.82[GIH][hapmap];0.91[JPT][hapmap];0.90[MEX][hapmap];0.91[TSI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs433402	0.95[CEU][hapmap];0.84[CHB][hapmap];0.91[JPT][hapmap];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs437182	0.87[ASN][1000 genomes]
rs443876	0.84[CHB][hapmap];0.85[CHD][hapmap];0.91[JPT][hapmap];0.80[ASN][1000 genomes]
rs448918	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs455073	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs455381	1.00[CEU][hapmap];0.84[CHB][hapmap];0.91[JPT][hapmap];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs456205	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs456207	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs456793	0.86[ASN][1000 genomes]
rs457420	0.94[CHB][hapmap];0.88[CHD][hapmap];0.91[JPT][hapmap];0.83[ASN][1000 genomes]
rs459571	0.95[CEU][hapmap];0.94[CHB][hapmap];0.91[JPT][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs460154	1.00[CEU][hapmap];0.94[CHB][hapmap];0.90[CHD][hapmap];0.87[GIH][hapmap];0.91[JPT][hapmap];0.88[TSI][hapmap];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs460888	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs461462	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs464826	0.94[CHB][hapmap];0.87[CHD][hapmap];0.86[JPT][hapmap]
rs465535	0.95[CEU][hapmap];0.89[CHB][hapmap];0.91[JPT][hapmap];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs465724	1.00[CEU][hapmap];0.94[CHB][hapmap];0.95[CHD][hapmap];0.87[GIH][hapmap];0.91[JPT][hapmap];0.88[TSI][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs466681	0.89[EUR][1000 genomes]
rs467303	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs467379	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs467387	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs55923934	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs736902	0.80[CHD][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs756679	0.82[JPT][hapmap];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894125	chr9:136723520-136931957	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv831748	chr9:136788484-136944326	Genic enhancers Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
3	nsv894132	chr9:136813341-136950691	Active TSS Genic enhancers Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
4	nsv428226	chr9:136825035-136994606	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
5	nsv894135	chr9:136839840-136927657	Strong transcription Enhancers Genic enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
6	nsv894136	chr9:136839840-136938961	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
7	nsv894137	chr9:136839840-136950691	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
8	nsv894138	chr9:136839840-137093168	Strong transcription Genic enhancers Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
9	nsv825148	chr9:136848471-137025632	Flanking Bivalent TSS/Enh Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
10	nsv894139	chr9:136863932-136950691	Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
11	nsv894140	chr9:136865879-136927657	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
12	nsv894141	chr9:136865879-136938961	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
13	nsv466627	chr9:136870787-136938961	Enhancers Flanking Active TSS Genic enhancers Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
14	nsv615774	chr9:136870787-136938961	Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
15	nsv1048571	chr9:136872166-137265444	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
16	nsv894145	chr9:136874066-136925451	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Genic enhancers Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
17	nsv894146	chr9:136874066-136938961	Strong transcription Enhancers Active TSS Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
18	nsv894147	chr9:136874066-136950691	Enhancers Genic enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
19	nsv894148	chr9:136874066-137093168	Enhancers Strong transcription Weak transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
20	nsv894149	chr9:136874158-136950691	Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
21	nsv894150	chr9:136887757-136944827	ZNF genes & repeats Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
22	nsv894151	chr9:136887757-137397609	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
23	nsv466629	chr9:136893867-136938961	Genic enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
24	nsv615779	chr9:136893867-136938961	Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
25	esv1806029	chr9:136906752-136933825	Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
26	nsv430110	chr9:136909280-136964450	Weak transcription Genic enhancers Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
27	nsv894152	chr9:136921015-136950691	Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS Genic enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs2810491	QSOX2	cis	parietal	SCAN
rs2810491	GTF3C4	cis	parietal	SCAN
rs2810491	QRFP	cis	cerebellum	SCAN
rs2810491	CARD9	cis	parietal	SCAN
rs2810491	BRD3	cis	multi-tissue	Pritchard
rs2810491	BRD3	cis	parietal	SCAN

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:136899200-136924600	Weak transcription	GM12878-XiMat	blood
2	chr9:136901600-136923600	Weak transcription	HUVEC	blood vessel
3	chr9:136903600-136927000	Strong transcription	Thymus	Thymus
4	chr9:136914600-136924200	Weak transcription	Primary hematopoietic stem cells	blood
5	chr9:136914800-136923800	Weak transcription	Primary B cells from cord blood	blood
6	chr9:136915600-136925000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
7	chr9:136916600-136925000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr9:136917000-136930800	Weak transcription	K562	blood
9	chr9:136917800-136925600	Genic enhancers	Spleen	Spleen
10	chr9:136918000-136923600	Genic enhancers	Gastric	stomach
11	chr9:136918200-136929000	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr9:136918200-136930800	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr9:136918400-136926200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr9:136918400-136926800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr9:136918400-136927800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
16	chr9:136918600-136924600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
17	chr9:136918600-136930600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
18	chr9:136918800-136925600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr9:136918800-136930000	Weak transcription	HUES48 Cell Line	embryonic stem cell
20	chr9:136918800-136930800	Weak transcription	H9 Cell Line	embryonic stem cell
21	chr9:136919000-136924000	Genic enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr9:136919000-136925800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr9:136919000-136929000	Enhancers	Psoas Muscle	Psoas
24	chr9:136919200-136928400	Enhancers	Pancreas	Pancrea
25	chr9:136919200-136930800	Weak transcription	HUES64 Cell Line	embryonic stem cell
26	chr9:136919400-136924400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
27	chr9:136919400-136925000	Enhancers	Right Atrium	heart
28	chr9:136919400-136930600	Enhancers	Breast Myoepithelial Primary Cells	Breast
29	chr9:136919600-136923600	Enhancers	Lung	lung
30	chr9:136919600-136924800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
31	chr9:136919800-136927600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
32	chr9:136919800-136930800	Enhancers	Primary T cells fromperipheralblood	blood
33	chr9:136920000-136930800	Enhancers	Ovary	ovary
34	chr9:136920200-136923600	Enhancers	Stomach Mucosa	stomach
35	chr9:136920200-136924400	Enhancers	Fetal Intestine Large	intestine
36	chr9:136920200-136924800	Enhancers	Brain Hippocampus Middle	brain
37	chr9:136920400-136924800	Enhancers	Brain Anterior Caudate	brain
38	chr9:136920400-136925000	Enhancers	Fetal Heart	heart
39	chr9:136920400-136928200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
40	chr9:136920400-136928200	Enhancers	Right Ventricle	heart
41	chr9:136920400-136929200	Genic enhancers	Fetal Intestine Small	intestine
42	chr9:136920400-136930800	Enhancers	Fetal Brain Male	brain
43	chr9:136920400-136930800	Enhancers	Left Ventricle	heart
44	chr9:136920600-136923400	Enhancers	Brain Inferior Temporal Lobe	brain
45	chr9:136920600-136925200	Enhancers	NH-A	brain
46	chr9:136920600-136925400	Enhancers	Brain Angular Gyrus	brain
47	chr9:136920600-136926600	Enhancers	Brain Substantia Nigra	brain
48	chr9:136920600-136927400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr9:136920600-136928200	Weak transcription	Dnd41	blood
50	chr9:136920600-136930800	Enhancers	Placenta	Placenta

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