The 2.0 version of rSNPBase

Variant report

Variant rs2811878
Chromosome Location chr1:59218368-59218369
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59206200-59221000 Weak transcription Fetal Intestine Small intestine
2 chr1:59207600-59220000 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:59207800-59220000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:59207800-59220000 Weak transcription Psoas Muscle Psoas
5 chr1:59211600-59221000 Weak transcription Stomach Mucosa stomach
6 chr1:59212000-59220000 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr1:59212600-59218800 Weak transcription NH-A brain
8 chr1:59212800-59218600 Weak transcription HMEC breast
9 chr1:59212800-59218600 Weak transcription NHLF lung
10 chr1:59213000-59218400 Weak transcription Muscle Satellite Cultured Cells --
11 chr1:59214400-59218400 Enhancers HepG2 liver
12 chr1:59215000-59218800 Weak transcription Fetal Muscle Leg muscle
13 chr1:59215200-59218400 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr1:59215200-59218600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:59215200-59221200 Weak transcription Fetal Brain Female brain
16 chr1:59215200-59221200 Weak transcription Fetal Stomach stomach
17 chr1:59215400-59218400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:59215400-59218400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:59215400-59218600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr1:59215400-59218600 Weak transcription Fetal Lung lung
21 chr1:59215400-59219800 Weak transcription Fetal Brain Male brain
22 chr1:59215400-59221000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr1:59215600-59218800 Weak transcription HUVEC blood vessel
24 chr1:59215800-59218400 Weak transcription NHEK skin
25 chr1:59215800-59218800 Weak transcription Brain Germinal Matrix brain
26 chr1:59216800-59220000 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr1:59217600-59221000 Enhancers Primary Natural Killer cells fromperipheralblood blood
28 chr1:59217800-59218800 Weak transcription Primary hematopoietic stem cells blood
29 chr1:59217800-59220800 Enhancers Hela-S3 cervix
30 chr1:59217800-59221000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:59218000-59218600 Enhancers Liver Liver
32 chr1:59218000-59219600 Enhancers Pancreatic Islets Pancreatic Islet
33 chr1:59218000-59220800 Enhancers Dnd41 blood
34 chr1:59218000-59223200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:59218200-59218400 Enhancers Primary T cells fromperipheralblood blood
36 chr1:59218200-59219000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:59218200-59219000 Enhancers Right Atrium heart
38 chr1:59218200-59219600 Enhancers Pancreas Pancrea
39 chr1:59218200-59220800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:59218200-59220800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:59218200-59221000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:59218200-59223000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:59218200-59223200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:59218200-59223800 Enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015