Variant report

Variant rs2812298
Chromosome Location chr9:108207580-108207581
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:108195800-108209800 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr9:108201000-108207600 Weak transcription Stomach Smooth Muscle stomach
3 chr9:108201000-108209600 Weak transcription Primary monocytes fromperipheralblood blood
4 chr9:108201600-108209800 Weak transcription NHLF lung
5 chr9:108203400-108208400 Enhancers Brain Substantia Nigra brain
6 chr9:108204200-108209800 Weak transcription Right Ventricle heart
7 chr9:108204400-108207800 Weak transcription Right Atrium heart
8 chr9:108204600-108207600 Weak transcription Brain Anterior Caudate brain
9 chr9:108204600-108209200 Weak transcription Fetal Brain Male brain
10 chr9:108204600-108209800 Weak transcription Liver Liver
11 chr9:108204600-108209800 Weak transcription Fetal Heart heart
12 chr9:108205600-108208400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr9:108206000-108209800 Weak transcription Psoas Muscle Psoas
14 chr9:108206200-108208200 Enhancers HSMM muscle
15 chr9:108206200-108209600 Enhancers Fetal Muscle Leg muscle
16 chr9:108206400-108208200 Enhancers Brain Angular Gyrus brain
17 chr9:108206600-108208000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr9:108206600-108208200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr9:108206600-108208200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
20 chr9:108206600-108208200 Enhancers HSMMtube muscle
21 chr9:108206600-108209600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr9:108206800-108209200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr9:108206800-108209400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr9:108206800-108209600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr9:108207000-108209200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr9:108207000-108209400 Weak transcription NHEK skin
27 chr9:108207000-108209600 Weak transcription HMEC breast
28 chr9:108207000-108209600 Weak transcription NH-A brain
29 chr9:108207000-108209800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr9:108207200-108208200 Enhancers NHDF-Ad bronchial
31 chr9:108207400-108207600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr9:108207400-108208000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr9:108207400-108208000 Enhancers Adipose Nuclei Adipose
34 chr9:108207400-108208000 Enhancers Duodenum Mucosa Duodenum
35 chr9:108207400-108208000 Enhancers Left Ventricle heart
36 chr9:108207400-108208200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr9:108207400-108208200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr9:108207400-108208200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
39 chr9:108207400-108208400 Enhancers Muscle Satellite Cultured Cells --
40 chr9:108207400-108208400 Enhancers Brain Cingulate Gyrus brain
41 chr9:108207400-108208400 Enhancers Brain Inferior Temporal Lobe brain
42 chr9:108207400-108208400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
43 chr9:108207400-108208400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
44 chr9:108207400-108208400 Flanking Active TSS HepG2 liver
45 chr9:108207400-108208600 Enhancers Brain Hippocampus Middle brain
46 chr9:108207400-108208800 Enhancers Fetal Muscle Trunk muscle

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