The 2.0 version of rSNPBase

Variant report

Variant rs62575106
Chromosome Location chr3:101190820-101190821
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:101160200-101210800 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr3:101161400-101196800 Weak transcription Thymus Thymus
3 chr3:101161400-101207600 Weak transcription Aorta Aorta
4 chr3:101171200-101230400 Weak transcription Brain Substantia Nigra brain
5 chr3:101171400-101193400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr3:101171400-101207800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr3:101174000-101202000 Weak transcription Brain Inferior Temporal Lobe brain
8 chr3:101174600-101211000 Weak transcription Duodenum Mucosa Duodenum
9 chr3:101176000-101211200 Weak transcription Muscle Satellite Cultured Cells --
10 chr3:101176600-101211600 Weak transcription HSMM muscle
11 chr3:101176800-101193400 Weak transcription Fetal Muscle Trunk muscle
12 chr3:101176800-101203200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr3:101176800-101211200 Weak transcription Stomach Smooth Muscle stomach
14 chr3:101176800-101211400 Weak transcription Colon Smooth Muscle Colon
15 chr3:101177600-101191600 Weak transcription Primary B cells from cord blood blood
16 chr3:101177600-101194200 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr3:101177600-101210800 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr3:101177800-101193200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr3:101177800-101194200 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr3:101177800-101202000 Weak transcription Dnd41 blood
21 chr3:101177800-101202800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr3:101178000-101192200 Weak transcription Primary B cells from peripheral blood blood
23 chr3:101178200-101193400 Weak transcription Fetal Lung lung
24 chr3:101178200-101207000 Weak transcription Primary monocytes fromperipheralblood blood
25 chr3:101181000-101193400 Weak transcription Primary hematopoietic stem cells blood
26 chr3:101184200-101197000 Weak transcription Small Intestine intestine
27 chr3:101184400-101191600 Weak transcription Fetal Brain Male brain
28 chr3:101184400-101203200 Weak transcription Ovary ovary
29 chr3:101185800-101197800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr3:101186000-101193200 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr3:101186000-101194200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr3:101186000-101211000 Weak transcription Brain Anterior Caudate brain
33 chr3:101186000-101211000 Weak transcription Pancreas Pancrea
34 chr3:101186000-101211000 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr3:101186200-101193200 Weak transcription Fetal Thymus thymus
36 chr3:101186200-101193800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr3:101186200-101203200 Weak transcription Left Ventricle heart
38 chr3:101186200-101203400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr3:101186200-101203600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr3:101186200-101211200 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr3:101186400-101193400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr3:101186400-101194200 Weak transcription Rectal Smooth Muscle rectum
43 chr3:101186400-101199400 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr3:101186400-101202600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr3:101186400-101210600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr3:101186400-101223600 Weak transcription Gastric stomach
47 chr3:101186800-101193200 Weak transcription Primary T cells fromperipheralblood blood
48 chr3:101186800-101196200 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr3:101186800-101196800 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr3:101186800-101197600 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015