Variant report

Variant	rs2814776
Chromosome Location	chr1:159171152-159171153
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:159162126..159163793-chr1:159168944..159171497,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AIM2-1	chr1:159171096-159171411	ENSG00000225670.3

rs_ID	r²[population]
rs2746046	1.00[EUR][1000 genomes]
rs2814778	1.00[EUR][1000 genomes]

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159158400-159174000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr1:159158800-159171200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr1:159158800-159177600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr1:159158800-159177800	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr1:159158800-159188800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr1:159159600-159173200	Strong transcription	Fetal Brain Female	brain
7	chr1:159163000-159173800	Weak transcription	Fetal Brain Male	brain
8	chr1:159164200-159172600	Strong transcription	Brain Germinal Matrix	brain
9	chr1:159167800-159171200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr1:159168000-159174000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr1:159168000-159177600	Weak transcription	H1 Cell Line	embryonic stem cell
12	chr1:159168400-159171800	Weak transcription	Brain Cingulate Gyrus	brain
13	chr1:159168400-159177600	Weak transcription	Brain Angular Gyrus	brain
14	chr1:159169600-159172400	Enhancers	Fetal Thymus	thymus
15	chr1:159170200-159171400	Weak transcription	K562	blood
16	chr1:159170200-159172400	Enhancers	Primary T cells from cord blood	blood
17	chr1:159170200-159172400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
18	chr1:159170400-159172400	Enhancers	Primary monocytes fromperipheralblood	blood
19	chr1:159170400-159172400	Enhancers	Monocytes-CD14+_RO01746	blood
20	chr1:159170400-159173400	Weak transcription	Fetal Stomach	stomach
21	chr1:159170400-159173600	Weak transcription	Brain Anterior Caudate	brain
22	chr1:159170400-159174200	Weak transcription	Brain Inferior Temporal Lobe	brain
23	chr1:159170400-159177800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr1:159170600-159171200	Weak transcription	Esophagus	oesophagus
25	chr1:159170600-159171200	Active TSS	Spleen	Spleen
26	chr1:159170600-159171400	Enhancers	Primary hematopoietic stem cells	blood
27	chr1:159170800-159174400	Enhancers	Lung	lung
28	chr1:159170800-159177600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr1:159171000-159171200	Bivalent Enhancer	Brain Hippocampus Middle	brain
30	chr1:159171000-159171800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
31	chr1:159171000-159171800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr1:159171000-159171800	Active TSS	Skeletal Muscle Female	skeletal muscle
33	chr1:159171000-159172000	Enhancers	Primary neutrophils fromperipheralblood	blood
34	chr1:159171000-159172200	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
35	chr1:159171000-159172200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr1:159171000-159173400	Bivalent Enhancer	Placenta	Placenta

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