Variant report

Variant	rs2823092
Chromosome Location	chr21:16519704-16519705
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11908936	0.89[EUR][1000 genomes]
rs17002087	0.96[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2014048	0.96[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2403881	0.88[CEU][hapmap];0.84[EUR][1000 genomes]
rs2823100	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs741936	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16513000-16521600	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr21:16514600-16529600	Weak transcription	Primary hematopoietic stem cells	blood
3	chr21:16516800-16520800	Weak transcription	Adipose Nuclei	Adipose
4	chr21:16516800-16521800	Weak transcription	Liver	Liver
5	chr21:16517200-16526800	Weak transcription	Pancreas	Pancrea
6	chr21:16519400-16520000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr21:16519600-16520000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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