The 2.0 version of rSNPBase

Variant report

Variant rs28371011
Chromosome Location chr2:179376417-179376418
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179346400-179387800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:179350400-179384400 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr2:179359400-179382800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr2:179359600-179387600 Weak transcription Right Ventricle heart
5 chr2:179359600-179387800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr2:179360600-179382400 Weak transcription Gastric stomach
7 chr2:179360600-179383200 Weak transcription Pancreas Pancrea
8 chr2:179360800-179376600 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr2:179360800-179383000 Weak transcription Aorta Aorta
10 chr2:179360800-179387800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr2:179361000-179387800 Weak transcription Spleen Spleen
12 chr2:179361400-179387200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr2:179364600-179382800 Weak transcription Thymus Thymus
14 chr2:179365000-179383000 Weak transcription Lung lung
15 chr2:179365600-179387800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr2:179366000-179387600 Weak transcription Fetal Brain Male brain
17 chr2:179366000-179387800 Weak transcription Small Intestine intestine
18 chr2:179367400-179383200 Weak transcription NHLF lung
19 chr2:179367600-179387600 Weak transcription Fetal Kidney kidney
20 chr2:179367800-179387600 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr2:179368000-179378600 Weak transcription NHEK skin
22 chr2:179368000-179379600 Weak transcription Left Ventricle heart
23 chr2:179368000-179383000 Weak transcription Ovary ovary
24 chr2:179368200-179377000 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr2:179368200-179378800 Weak transcription Rectal Smooth Muscle rectum
26 chr2:179368200-179378800 Weak transcription HSMMtube muscle
27 chr2:179368200-179379200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr2:179368200-179382400 Weak transcription Brain Germinal Matrix brain
29 chr2:179368200-179387600 Weak transcription Fetal Heart heart
30 chr2:179368200-179387600 Weak transcription Fetal Lung lung
31 chr2:179368200-179387800 Weak transcription Brain Substantia Nigra brain
32 chr2:179368400-179383000 Weak transcription Placenta Amnion Placenta Amnion
33 chr2:179368400-179383400 Weak transcription Brain Angular Gyrus brain
34 chr2:179368400-179387400 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr2:179368400-179387600 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr2:179368600-179377200 Weak transcription Primary hematopoietic stem cells blood
37 chr2:179368600-179378600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr2:179368600-179381200 Weak transcription Brain Anterior Caudate brain
39 chr2:179368600-179382400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr2:179368600-179382600 Weak transcription Brain Cingulate Gyrus brain
41 chr2:179368600-179383000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr2:179368600-179387400 Weak transcription A549 lung
43 chr2:179368600-179387600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr2:179368600-179387800 Weak transcription Psoas Muscle Psoas
45 chr2:179368800-179378400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr2:179369000-179378600 Weak transcription HMEC breast
47 chr2:179369000-179387400 Weak transcription Colon Smooth Muscle Colon
48 chr2:179369200-179378600 Weak transcription NHDF-Ad bronchial
49 chr2:179369200-179387400 Weak transcription K562 blood
50 chr2:179369200-179387600 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015