The 2.0 version of rSNPBase

Variant report

Variant rs28378734
Chromosome Location chr11:45247497-45247498
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:45205800-45251800 Weak transcription Primary T helper cells PMA-I stimulated --
2 chr11:45206000-45247800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr11:45206600-45251600 Weak transcription HepG2 liver
4 chr11:45210200-45247600 Weak transcription H9 Cell Line embryonic stem cell
5 chr11:45210200-45251600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr11:45224800-45247800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr11:45232000-45247600 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr11:45232200-45247600 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr11:45232200-45247800 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr11:45232400-45247600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr11:45232400-45247800 Weak transcription H1 Cell Line embryonic stem cell
12 chr11:45232400-45247800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr11:45232400-45247800 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr11:45232400-45250400 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr11:45232600-45255200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr11:45232800-45248000 Weak transcription Fetal Brain Male brain
17 chr11:45233600-45248800 Weak transcription Fetal Heart heart
18 chr11:45235200-45247600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr11:45235200-45247600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr11:45235200-45247600 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr11:45235200-45247800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr11:45235400-45247600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr11:45235600-45247800 Weak transcription Colonic Mucosa Colon
24 chr11:45235600-45251800 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr11:45235600-45255000 Strong transcription Fetal Stomach stomach
26 chr11:45235800-45247600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr11:45237200-45252400 Weak transcription Psoas Muscle Psoas
28 chr11:45237400-45247800 Weak transcription Small Intestine intestine
29 chr11:45239400-45257200 Weak transcription Right Atrium heart
30 chr11:45239800-45265400 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr11:45240400-45251600 Strong transcription Fetal Adrenal Gland Adrenal Gland
32 chr11:45240400-45252000 Strong transcription Fetal Muscle Leg muscle
33 chr11:45240800-45250600 Strong transcription Primary hematopoietic stem cells short term culture blood
34 chr11:45240800-45250800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr11:45240800-45251400 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr11:45241000-45248400 Strong transcription Lung lung
37 chr11:45241000-45249600 Strong transcription Brain Inferior Temporal Lobe brain
38 chr11:45241000-45249800 Strong transcription Ovary ovary
39 chr11:45241000-45251000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr11:45241000-45252400 Strong transcription Fetal Muscle Trunk muscle
41 chr11:45241200-45248000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr11:45241200-45250800 Strong transcription Stomach Smooth Muscle stomach
43 chr11:45241400-45247600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr11:45241400-45250600 Strong transcription Duodenum Smooth Muscle Duodenum
45 chr11:45241800-45251200 Strong transcription Fetal Lung lung
46 chr11:45242000-45249600 Strong transcription Primary hematopoietic stem cells blood
47 chr11:45242200-45249800 Strong transcription Fetal Brain Female brain
48 chr11:45242400-45249800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr11:45242600-45249600 Strong transcription Rectal Mucosa Donor 29 rectum
50 chr11:45243800-45249600 Strong transcription Right Ventricle heart

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Last update: Aug 31, 2015