The 2.0 version of rSNPBase

Variant report

Variant rs28392616
Chromosome Location chr12:51562667-51562668
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51504800-51563400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr12:51513000-51565400 Weak transcription Fetal Lung lung
3 chr12:51519000-51565000 Weak transcription Colon Smooth Muscle Colon
4 chr12:51519000-51565200 Weak transcription Left Ventricle heart
5 chr12:51519000-51565200 Weak transcription Pancreas Pancrea
6 chr12:51519000-51565800 Weak transcription Esophagus oesophagus
7 chr12:51519200-51563800 Weak transcription Fetal Brain Female brain
8 chr12:51519200-51565000 Weak transcription Stomach Smooth Muscle stomach
9 chr12:51519400-51565200 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr12:51521600-51565200 Weak transcription HSMM muscle
11 chr12:51527400-51565200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr12:51530600-51564200 Weak transcription Fetal Muscle Leg muscle
13 chr12:51531200-51563400 Weak transcription Hela-S3 cervix
14 chr12:51532000-51565000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr12:51532400-51564000 Weak transcription Primary T cells from cord blood blood
16 chr12:51532600-51562800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr12:51532600-51564800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr12:51532600-51565200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr12:51532800-51563600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr12:51533000-51563200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr12:51533200-51564800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr12:51533600-51564800 Weak transcription Primary hematopoietic stem cells blood
23 chr12:51533600-51565000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr12:51534600-51564200 Weak transcription Fetal Intestine Large intestine
25 chr12:51539600-51565000 Weak transcription Primary B cells from peripheral blood blood
26 chr12:51540800-51564800 Weak transcription Duodenum Mucosa Duodenum
27 chr12:51543200-51565200 Weak transcription Psoas Muscle Psoas
28 chr12:51545000-51564200 Weak transcription Brain Germinal Matrix brain
29 chr12:51545000-51565000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr12:51545000-51565000 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr12:51550200-51563200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr12:51550400-51565400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr12:51550800-51564800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr12:51552200-51563600 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr12:51552400-51565000 Weak transcription Placenta Amnion Placenta Amnion
36 chr12:51553200-51565000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr12:51554000-51563400 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr12:51554400-51565000 Weak transcription HUVEC blood vessel
39 chr12:51554800-51564200 Weak transcription Primary monocytes fromperipheralblood blood
40 chr12:51554800-51564800 Weak transcription Brain Angular Gyrus brain
41 chr12:51554800-51565000 Weak transcription Brain Inferior Temporal Lobe brain
42 chr12:51554800-51565000 Weak transcription NHLF lung
43 chr12:51554800-51565200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr12:51554800-51565400 Weak transcription Brain Anterior Caudate brain
45 chr12:51555000-51564600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr12:51555000-51564800 Weak transcription Brain Hippocampus Middle brain
47 chr12:51555200-51563600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr12:51555200-51563800 Weak transcription K562 blood
49 chr12:51555200-51564600 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr12:51555200-51564800 Weak transcription A549 lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015