The 2.0 version of rSNPBase

Variant report

Variant rs28393675
Chromosome Location chr4:90673841-90673842
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:90646800-90674000 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr4:90649400-90674000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr4:90649400-90696400 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr4:90659600-90674000 Weak transcription HMEC breast
5 chr4:90663400-90691400 Weak transcription Dnd41 blood
6 chr4:90664200-90674000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr4:90664400-90674200 Weak transcription Primary hematopoietic stem cells blood
8 chr4:90664600-90678000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr4:90664800-90674400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr4:90668600-90674000 Weak transcription Fetal Lung lung
11 chr4:90669000-90674000 Weak transcription Fetal Kidney kidney
12 chr4:90669200-90674000 Weak transcription Brain Cingulate Gyrus brain
13 chr4:90669200-90674000 Weak transcription Ovary ovary
14 chr4:90669200-90674200 Weak transcription Brain Anterior Caudate brain
15 chr4:90669200-90674400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr4:90669400-90674000 Weak transcription Brain Hippocampus Middle brain
17 chr4:90670200-90674000 Weak transcription Brain Substantia Nigra brain
18 chr4:90672600-90674000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr4:90672600-90674000 Enhancers Hela-S3 cervix
20 chr4:90672600-90674200 Enhancers NHDF-Ad bronchial
21 chr4:90673000-90674000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr4:90673000-90674000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr4:90673000-90674000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr4:90673000-90674000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr4:90673000-90674200 Weak transcription Small Intestine intestine
26 chr4:90673200-90674000 Enhancers HUVEC blood vessel
27 chr4:90673400-90674600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr4:90673400-90679200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr4:90673600-90674000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr4:90673800-90674000 Enhancers Muscle Satellite Cultured Cells --
31 chr4:90673800-90675000 Enhancers Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015