The 2.0 version of rSNPBase

Variant report

Variant rs28396908
Chromosome Location chr8:102773384-102773385
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:102761400-102781000 Weak transcription Liver Liver
2 chr8:102769000-102774800 Enhancers Pancreatic Islets Pancreatic Islet
3 chr8:102769600-102803000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr8:102770200-102774200 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr8:102770200-102774200 Enhancers Brain Cingulate Gyrus brain
6 chr8:102770200-102774200 Enhancers Rectal Smooth Muscle rectum
7 chr8:102770400-102773800 Enhancers Right Atrium heart
8 chr8:102770400-102774000 Enhancers Brain Angular Gyrus brain
9 chr8:102770400-102774000 Enhancers Brain Substantia Nigra brain
10 chr8:102770400-102774200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr8:102770400-102774200 Enhancers Fetal Stomach stomach
12 chr8:102770400-102774400 Enhancers Cortex derived primary cultured neurospheres brain
13 chr8:102770600-102773600 Enhancers Brain Inferior Temporal Lobe brain
14 chr8:102770600-102786800 Weak transcription Esophagus oesophagus
15 chr8:102770800-102774000 Enhancers Adipose Nuclei Adipose
16 chr8:102770800-102774400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr8:102771000-102773400 Enhancers Fetal Heart heart
18 chr8:102771000-102774200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr8:102771200-102773600 Enhancers HMEC breast
20 chr8:102771200-102774200 Enhancers ES-I3 Cell Line embryonic stem cell
21 chr8:102771200-102774600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr8:102771200-102775000 Enhancers Fetal Muscle Leg muscle
23 chr8:102771400-102774200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr8:102771400-102774200 Enhancers Fetal Lung lung
25 chr8:102771400-102774600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr8:102771600-102773400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr8:102771600-102773600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
28 chr8:102771600-102773600 Enhancers Pancreas Pancrea
29 chr8:102771600-102773800 Enhancers Brain Hippocampus Middle brain
30 chr8:102771600-102774000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr8:102771600-102774000 Enhancers Duodenum Smooth Muscle Duodenum
32 chr8:102771600-102774400 Enhancers Colon Smooth Muscle Colon
33 chr8:102771600-102774400 Enhancers Psoas Muscle Psoas
34 chr8:102771800-102773600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
35 chr8:102771800-102774000 Enhancers iPS-15b Cell Line embryonic stem cell
36 chr8:102771800-102774000 Enhancers Placenta Amnion Placenta Amnion
37 chr8:102771800-102774000 Enhancers Rectal Mucosa Donor 31 rectum
38 chr8:102771800-102774200 Enhancers Left Ventricle heart
39 chr8:102771800-102774200 Enhancers Ovary ovary
40 chr8:102771800-102774200 Enhancers HSMMtube muscle
41 chr8:102772000-102773600 Enhancers Fetal Intestine Large intestine
42 chr8:102772000-102773600 Enhancers Fetal Intestine Small intestine
43 chr8:102772000-102773600 Enhancers NH-A brain
44 chr8:102772000-102773800 Enhancers ES-WA7 Cell Line embryonic stem cell
45 chr8:102772000-102774000 Enhancers Stomach Smooth Muscle stomach
46 chr8:102772000-102774200 Enhancers Fetal Adrenal Gland Adrenal Gland
47 chr8:102772000-102774200 Enhancers Fetal Kidney kidney
48 chr8:102772000-102774200 Enhancers HSMM muscle
49 chr8:102772000-102774400 Enhancers Right Ventricle heart
50 chr8:102772200-102773400 Enhancers Lung lung

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Last update: Aug 31, 2015