Variant report
| Variant | rs28399642 |
|---|---|
| Chromosome Location | chr19:45325337-45325338 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:45313000-45325400 | Weak transcription | Brain Hippocampus Middle | brain |
| 2 | chr19:45313600-45326400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 3 | chr19:45313600-45326600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 4 | chr19:45314600-45326200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr19:45318400-45326400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 6 | chr19:45319000-45326400 | Weak transcription | Gastric | stomach |
| 7 | chr19:45319000-45326800 | Weak transcription | Fetal Kidney | kidney |
| 8 | chr19:45319200-45325400 | Weak transcription | HMEC | breast |
| 9 | chr19:45319200-45326400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 10 | chr19:45321000-45327000 | Enhancers | Fetal Heart | heart |
| 11 | chr19:45321400-45325600 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 12 | chr19:45321600-45326400 | Weak transcription | Liver | Liver |
| 13 | chr19:45322000-45326200 | Weak transcription | A549 | lung |
| 14 | chr19:45322000-45326400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 15 | chr19:45322000-45326400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 16 | chr19:45322600-45326600 | Enhancers | Left Ventricle | heart |
| 17 | chr19:45323000-45325400 | Weak transcription | Aorta | Aorta |
| 18 | chr19:45323000-45326000 | Weak transcription | HepG2 | liver |
| 19 | chr19:45323200-45326800 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 20 | chr19:45323400-45325600 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 21 | chr19:45323600-45326400 | Weak transcription | Pancreas | Pancrea |
| 22 | chr19:45323800-45326400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 23 | chr19:45323800-45326600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 24 | chr19:45324000-45328200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 25 | chr19:45324200-45325400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 26 | chr19:45324200-45325400 | Weak transcription | Adipose Nuclei | Adipose |
| 27 | chr19:45324200-45325600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 28 | chr19:45324200-45325800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 29 | chr19:45324200-45326400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 30 | chr19:45324200-45326400 | Weak transcription | Fetal Intestine Small | intestine |
| 31 | chr19:45324200-45326400 | Weak transcription | Lung | lung |
| 32 | chr19:45324200-45326600 | Weak transcription | Fetal Intestine Large | intestine |
| 33 | chr19:45324200-45327400 | Enhancers | Fetal Muscle Trunk | muscle |
| 34 | chr19:45324200-45327400 | Enhancers | Fetal Muscle Leg | muscle |
| 35 | chr19:45324400-45326400 | Weak transcription | Fetal Lung | lung |
| 36 | chr19:45324600-45326400 | Weak transcription | Right Atrium | heart |
| 37 | chr19:45324800-45327200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 38 | chr19:45324800-45329000 | Weak transcription | Right Ventricle | heart |
| 39 | chr19:45325000-45325400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 40 | chr19:45325200-45325800 | Enhancers | Placenta | Placenta |
