Variant report

Variant rs28399975
Chromosome Location chr6:31725597-31725598
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31708200-31733800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr6:31708400-31727000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr6:31708400-31729600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr6:31708400-31731000 Weak transcription HSMMtube muscle
5 chr6:31708400-31731200 Weak transcription Gastric stomach
6 chr6:31708400-31731200 Weak transcription Lung lung
7 chr6:31708400-31731200 Weak transcription Right Atrium heart
8 chr6:31708600-31728200 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr6:31708600-31729400 Weak transcription Fetal Lung lung
10 chr6:31708600-31731200 Weak transcription Brain Hippocampus Middle brain
11 chr6:31708600-31732000 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr6:31708600-31734400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr6:31708800-31727400 Weak transcription Primary T cells fromperipheralblood blood
14 chr6:31708800-31727600 Weak transcription Spleen Spleen
15 chr6:31708800-31731200 Weak transcription Brain Anterior Caudate brain
16 chr6:31708800-31737400 Weak transcription Liver Liver
17 chr6:31709000-31726800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr6:31709000-31727000 Weak transcription Primary T cells from cord blood blood
19 chr6:31709000-31727600 Weak transcription Colonic Mucosa Colon
20 chr6:31709000-31738200 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr6:31709200-31727200 Weak transcription Brain Germinal Matrix brain
22 chr6:31709200-31728400 Weak transcription Stomach Mucosa stomach
23 chr6:31709200-31737400 Weak transcription Primary B cells from peripheral blood blood
24 chr6:31709600-31727800 Weak transcription Hela-S3 cervix
25 chr6:31709600-31737400 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr6:31709800-31727200 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr6:31710000-31731000 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr6:31710600-31731200 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr6:31710800-31726400 Weak transcription Primary hematopoietic stem cells blood
30 chr6:31710800-31731000 Weak transcription HUVEC blood vessel
31 chr6:31711200-31727600 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr6:31711200-31731400 Weak transcription Fetal Kidney kidney
33 chr6:31711400-31726600 Weak transcription Primary B cells from cord blood blood
34 chr6:31712000-31726800 Weak transcription Primary monocytes fromperipheralblood blood
35 chr6:31712200-31728000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr6:31715200-31728200 Weak transcription HMEC breast
37 chr6:31715200-31734000 Weak transcription Esophagus oesophagus
38 chr6:31715400-31727200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr6:31715400-31733800 Weak transcription Ovary ovary
40 chr6:31715400-31733800 Weak transcription Stomach Smooth Muscle stomach
41 chr6:31715600-31726400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr6:31715600-31727000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr6:31715600-31727000 Weak transcription Fetal Intestine Large intestine
44 chr6:31715600-31727000 Weak transcription Placenta Placenta
45 chr6:31715600-31727000 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr6:31715600-31727200 Weak transcription Fetal Brain Female brain
47 chr6:31715600-31727800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr6:31715600-31730800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr6:31715600-31733800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr6:31715800-31726400 Weak transcription Adipose Nuclei Adipose

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