The 2.0 version of rSNPBase

Variant report

Variant rs28424223
Chromosome Location chr6:37148434-37148435
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37141000-37165000 Weak transcription Right Atrium heart
2 chr6:37142600-37159600 Weak transcription Fetal Heart heart
3 chr6:37143200-37150600 Weak transcription Gastric stomach
4 chr6:37143200-37153000 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr6:37143400-37150400 Weak transcription Lung lung
6 chr6:37143400-37150600 Weak transcription Thymus Thymus
7 chr6:37143400-37150600 Weak transcription HepG2 liver
8 chr6:37143400-37155200 Weak transcription H1 Cell Line embryonic stem cell
9 chr6:37143400-37159600 Weak transcription Placenta Amnion Placenta Amnion
10 chr6:37143600-37150600 Weak transcription Liver Liver
11 chr6:37143600-37150600 Weak transcription Fetal Muscle Trunk muscle
12 chr6:37143600-37150800 Weak transcription Stomach Smooth Muscle stomach
13 chr6:37143600-37151200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr6:37143600-37151800 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr6:37143800-37148600 Weak transcription Brain Cingulate Gyrus brain
16 chr6:37143800-37150800 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr6:37143800-37151200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr6:37144000-37151200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr6:37144600-37155000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr6:37145000-37148600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr6:37145200-37150600 Weak transcription Spleen Spleen
22 chr6:37145200-37153400 Enhancers Primary Natural Killer cells fromperipheralblood blood
23 chr6:37145600-37162800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr6:37145800-37149400 Weak transcription Primary T cells from cord blood blood
25 chr6:37145800-37150600 Weak transcription Adipose Nuclei Adipose
26 chr6:37145800-37150600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr6:37145800-37150600 Weak transcription GM12878-XiMat blood
28 chr6:37145800-37159600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr6:37146000-37149000 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr6:37146000-37150400 Weak transcription Duodenum Mucosa Duodenum
31 chr6:37146200-37149400 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr6:37146200-37150000 Weak transcription Primary monocytes fromperipheralblood blood
33 chr6:37146200-37150000 Weak transcription Primary B cells from cord blood blood
34 chr6:37146200-37150200 Weak transcription Primary B cells from peripheral blood blood
35 chr6:37146400-37150600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr6:37147400-37150600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
37 chr6:37147400-37150600 Enhancers Primary T helper naive cells from peripheral blood blood
38 chr6:37147400-37150600 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr6:37147400-37150600 Enhancers Primary T killer memory cells from peripheral blood blood
40 chr6:37147400-37152000 Enhancers Primary T helper 17 cells PMA-I stimulated --
41 chr6:37147400-37153400 Enhancers Primary T cells fromperipheralblood blood
42 chr6:37147600-37150600 Enhancers Primary hematopoietic stem cells short term culture blood
43 chr6:37147600-37150600 Enhancers Primary T helper cells PMA-I stimulated --
44 chr6:37147600-37150600 Enhancers K562 blood
45 chr6:37147600-37150800 Enhancers Primary T helper cells fromperipheralblood blood
46 chr6:37147600-37152400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
47 chr6:37147600-37155200 Enhancers Primary T killer naive cells fromperipheralblood blood
48 chr6:37147800-37160800 Enhancers Primary hematopoietic stem cells blood
49 chr6:37148000-37152400 Enhancers Fetal Thymus thymus
50 chr6:37148400-37148800 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015