The 2.0 version of rSNPBase

Variant report

Variant rs9462280
Chromosome Location chr6:37150691-37150692
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37141000-37165000 Weak transcription Right Atrium heart
2 chr6:37142600-37159600 Weak transcription Fetal Heart heart
3 chr6:37143200-37153000 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr6:37143400-37155200 Weak transcription H1 Cell Line embryonic stem cell
5 chr6:37143400-37159600 Weak transcription Placenta Amnion Placenta Amnion
6 chr6:37143600-37150800 Weak transcription Stomach Smooth Muscle stomach
7 chr6:37143600-37151200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr6:37143600-37151800 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr6:37143800-37150800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr6:37143800-37151200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr6:37144000-37151200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr6:37144600-37155000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr6:37145200-37153400 Enhancers Primary Natural Killer cells fromperipheralblood blood
14 chr6:37145600-37162800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr6:37145800-37159600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr6:37147400-37152000 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr6:37147400-37153400 Enhancers Primary T cells fromperipheralblood blood
18 chr6:37147600-37150800 Enhancers Primary T helper cells fromperipheralblood blood
19 chr6:37147600-37152400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr6:37147600-37155200 Enhancers Primary T killer naive cells fromperipheralblood blood
21 chr6:37147800-37160800 Enhancers Primary hematopoietic stem cells blood
22 chr6:37148000-37152400 Enhancers Fetal Thymus thymus
23 chr6:37148400-37150800 Enhancers Primary T regulatory cells fromperipheralblood blood
24 chr6:37148600-37152200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
25 chr6:37149400-37152000 Enhancers Primary T cells from cord blood blood
26 chr6:37150000-37152400 Enhancers Primary B cells from cord blood blood
27 chr6:37150000-37158800 Enhancers Primary monocytes fromperipheralblood blood
28 chr6:37150200-37152200 Enhancers Primary B cells from peripheral blood blood
29 chr6:37150400-37150800 Enhancers Duodenum Mucosa Duodenum
30 chr6:37150400-37151400 Enhancers Lung lung
31 chr6:37150600-37150800 Enhancers Fetal Muscle Trunk muscle
32 chr6:37150600-37151000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
33 chr6:37150600-37151000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
34 chr6:37150600-37151000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
35 chr6:37150600-37151000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
36 chr6:37150600-37151000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
37 chr6:37150600-37151000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr6:37150600-37151000 Enhancers Adipose Nuclei Adipose
39 chr6:37150600-37151000 Enhancers Liver Liver
40 chr6:37150600-37151000 Enhancers Esophagus oesophagus
41 chr6:37150600-37151000 Enhancers Placenta Placenta
42 chr6:37150600-37151000 Enhancers Sigmoid Colon Sigmoid Colon
43 chr6:37150600-37151000 Flanking Active TSS Dnd41 blood
44 chr6:37150600-37151000 Enhancers HepG2 liver
45 chr6:37150600-37151000 Flanking Active TSS K562 blood
46 chr6:37150600-37151200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
47 chr6:37150600-37151200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
48 chr6:37150600-37151400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
49 chr6:37150600-37151400 Enhancers Fetal Adrenal Gland Adrenal Gland
50 chr6:37150600-37151400 Enhancers GM12878-XiMat blood

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Last update: Aug 31, 2015