Variant report

Variant rs28438593
Chromosome Location chr22:20869475-20869476
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20863800-20874400 Weak transcription iPS-18 Cell Line embryonic stem cell
2 chr22:20864200-20875000 Genic enhancers Primary T cells fromperipheralblood blood
3 chr22:20864400-20872200 Weak transcription Aorta Aorta
4 chr22:20864400-20875400 Genic enhancers Fetal Adrenal Gland Adrenal Gland
5 chr22:20864400-20913000 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr22:20864800-20903600 Weak transcription Fetal Brain Male brain
7 chr22:20865000-20874600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr22:20865000-20876800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr22:20865000-20881000 Weak transcription H1 Cell Line embryonic stem cell
10 chr22:20865200-20878000 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr22:20865400-20871200 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr22:20865600-20876400 Weak transcription Fetal Lung lung
13 chr22:20865600-20877400 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr22:20865600-20877800 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr22:20865600-20881000 Weak transcription Fetal Kidney kidney
16 chr22:20865800-20869600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
17 chr22:20865800-20870800 Weak transcription Colonic Mucosa Colon
18 chr22:20865800-20872200 Weak transcription Pancreas Pancrea
19 chr22:20865800-20880600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr22:20866000-20874000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr22:20866000-20874600 Weak transcription Brain Substantia Nigra brain
22 chr22:20866200-20872600 Weak transcription Brain Cingulate Gyrus brain
23 chr22:20866200-20880800 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr22:20866800-20877800 Weak transcription Small Intestine intestine
25 chr22:20867200-20871000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr22:20867200-20877800 Strong transcription Fetal Intestine Small intestine
27 chr22:20867400-20869600 Strong transcription Fetal Brain Female brain
28 chr22:20867400-20869600 Strong transcription Dnd41 blood
29 chr22:20867600-20871000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr22:20867800-20869600 Genic enhancers Primary T helper naive cells from peripheral blood blood
31 chr22:20867800-20869600 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
32 chr22:20867800-20869600 Genic enhancers Primary T helper cells fromperipheralblood blood
33 chr22:20867800-20869600 Genic enhancers Primary T killer memory cells from peripheral blood blood
34 chr22:20867800-20869600 Strong transcription Brain Germinal Matrix brain
35 chr22:20867800-20869600 Strong transcription Fetal Muscle Leg muscle
36 chr22:20867800-20869800 Genic enhancers Primary T killer naive cells fromperipheralblood blood
37 chr22:20867800-20869800 Strong transcription Fetal Thymus thymus
38 chr22:20867800-20869800 Genic enhancers Left Ventricle heart
39 chr22:20867800-20869800 Genic enhancers Skeletal Muscle Male skeletal muscle
40 chr22:20867800-20870000 Genic enhancers HSMM muscle
41 chr22:20867800-20872800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr22:20867800-20874400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr22:20867800-20875400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr22:20868000-20869600 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr22:20868000-20869600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr22:20868000-20869600 Strong transcription HUES6 Cell Line embryonic stem cell
47 chr22:20868000-20869600 Strong transcription Primary B cells from cord blood blood
48 chr22:20868000-20869600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr22:20868000-20869600 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
50 chr22:20868000-20869600 Strong transcription Duodenum Mucosa Duodenum

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