Variant report

Variant	rs28681662
Chromosome Location	chr22:20906454-20906455
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr22:20906400-20906550	GM12864	blood:	n/a	chr22:20906502-20906511
2	CTCF	chr22:20906400-20906550	A549	lung:	n/a	chr22:20906502-20906511
3	POLR2A	chr22:20904721-20907790	K562	blood:	n/a	n/a
4	CTCF	chr22:20906360-20906510	AG04449	skin:	n/a	n/a
5	CTCF	chr22:20906445-20906597	LNCaP	prostate:	n/a	chr22:20906502-20906511
6	CTCF	chr22:20906434-20906553	A549	lung:	n/a	chr22:20906502-20906511
7	MXI1	chr22:20904668-20907935	IMR90	lung:	n/a	n/a
8	CTCF	chr22:20906400-20906550	NB4	blood:	n/a	chr22:20906502-20906511
9	CTCF	chr22:20906340-20906490	HVMF	connective:	n/a	n/a
10	CTCF	chr22:20906400-20906550	HPF	lung:	n/a	chr22:20906502-20906511
11	CTCF	chr22:20906420-20906570	AG09309	skin:	n/a	chr22:20906502-20906511
12	CTCF	chr22:20906420-20906570	GM12868	blood:	n/a	chr22:20906502-20906511
13	CTCF	chr22:20906440-20906590	GM06990	blood:	n/a	chr22:20906502-20906511
14	CTCF	chr22:20906440-20906590	HCPEpiC	choroid plexus:	n/a	chr22:20906502-20906511
15	CTCF	chr22:20906400-20906550	HBMEC	blood vessel:	n/a	chr22:20906502-20906511
16	CTCF	chr22:20906430-20906549	ProgFib	skin:	n/a	chr22:20906502-20906511
17	CTCF	chr22:20906420-20906570	AG09319	gingival:	n/a	chr22:20906502-20906511
18	CTCF	chr22:20906420-20906570	MCF-7	breast:	n/a	chr22:20906502-20906511
19	CTCF	chr22:20906400-20906550	HAc	cerebellar:	n/a	chr22:20906502-20906511
20	CTCF	chr22:20906380-20906530	Caco-2	colon:	n/a	chr22:20906502-20906511
21	CTCF	chr22:20906442-20906554	LNCaP	prostate:	n/a	chr22:20906502-20906511
22	CTCF	chr22:20906384-20906669	K562	blood:	n/a	chr22:20906502-20906511
23	CTCF	chr22:20906443-20906562	Fibrobl	skin:	n/a	chr22:20906502-20906511
24	CTCF	chr22:20906428-20906566	H1-hESC	embryonic stem cell:	n/a	chr22:20906502-20906511
25	CTCF	chr22:20906420-20906570	GM12872	blood:	n/a	chr22:20906502-20906511
26	CTCF	chr22:20906400-20906550	AG04449	skin:	n/a	chr22:20906502-20906511
27	CTCF	chr22:20906380-20906530	GM12875	blood:	n/a	chr22:20906502-20906511
28	CTCF	chr22:20906440-20906590	SAEC	small airway:	n/a	chr22:20906502-20906511
29	CTCF	chr22:20906420-20906570	A549	lung:	n/a	chr22:20906502-20906511
30	CTCF	chr22:20906360-20906510	BJ	skin:	n/a	n/a
31	CTCF	chr22:20906440-20906590	HCM	heart:	n/a	chr22:20906502-20906511
32	YY1	chr22:20906363-20906619	GM12892	blood:	n/a	n/a
33	CTCF	chr22:20906436-20906558	MCF-7	breast:	n/a	chr22:20906502-20906511
34	EBF1	chr22:20906443-20906666	GM12878	blood:	n/a	n/a
35	CTCF	chr22:20906440-20906590	GM12871	blood:	n/a	chr22:20906502-20906511
36	CTCF	chr22:20906440-20906590	NHDF-neo	bronchial:	n/a	chr22:20906502-20906511
37	CTCF	chr22:20906380-20906530	HA-sp	spinal cord:	n/a	chr22:20906502-20906511
38	CTCF	chr22:20906256-20906793	K562	blood:	n/a	chr22:20906502-20906511
39	CTCF	chr22:20906440-20906590	K562	blood:	n/a	chr22:20906502-20906511
40	CTCF	chr22:20906420-20906570	HMEC	breast:	n/a	chr22:20906502-20906511
41	CTCF	chr22:20906380-20906530	HRPEpiC	eye:	n/a	chr22:20906502-20906511
42	CTCF	chr22:20906440-20906590	NHLF	lung:	n/a	chr22:20906502-20906511
43	CTCF	chr22:20906440-20906590	GM12873	blood:	n/a	chr22:20906502-20906511
44	CTCF	chr22:20906400-20906550	HMF	breast:	n/a	chr22:20906502-20906511
45	CTCF	chr22:20906436-20906569	MCF-7	breast:	n/a	chr22:20906502-20906511
46	CTCF	chr22:20906380-20906530	GM12868	blood:	n/a	chr22:20906502-20906511
47	YY1	chr22:20906349-20906556	H1-hESC	embryonic stem cell:	n/a	n/a
48	POLR2A	chr22:20906103-20907729	K562	blood:	n/a	n/a
49	POLR2A	chr22:20906207-20907574	K562	blood:	n/a	n/a
50	CTCF	chr22:20906400-20906550	AG09319	gingival:	n/a	chr22:20906502-20906511

Variant related genes	Relation type
MED15	TF binding region

Extended variants
information (count: 75 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs16988498	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16988502	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16988513	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17211374	0.93[AFR][1000 genomes]
rs2079097	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2079098	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28438593	1.00[AMR][1000 genomes]
rs28676928	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs5751024	0.93[AFR][1000 genomes]
rs5758468	0.90[AFR][1000 genomes]
rs7287606	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8137443	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:63 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518950	chr22:20306993-20965555	Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
2	nsv432174	chr22:20309346-21102446	Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	77 gene(s)	inside rSNPs	diseases
3	nsv1056614	chr22:20470598-21462724	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
4	nsv491637	chr22:20659547-21440514	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
5	nsv916634	chr22:20659547-21464119	Strong transcription Flanking Active TSS Genic enhancers Weak transcription Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
6	nsv533942	chr22:20659547-21505417	Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
7	nsv529472	chr22:20659547-21561514	Flanking Active TSS Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
8	nsv914390	chr22:20697466-21460008	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
9	nsv588291	chr22:20698139-21461274	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
10	nsv917647	chr22:20708889-21440515	Genic enhancers Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
11	nsv531742	chr22:20708890-21407690	Strong transcription Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
12	nsv533852	chr22:20708890-21561514	Weak transcription Genic enhancers Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
13	nsv1061867	chr22:20716924-21462446	Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
14	nsv1058870	chr22:20716924-21567219	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
15	nsv918225	chr22:20716924-21611338	Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
16	nsv914393	chr22:20718116-21034788	Genic enhancers Strong transcription Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
17	nsv531744	chr22:20718170-21427936	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
18	nsv915954	chr22:20732437-21505417	Weak transcription Enhancers Genic enhancers Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
19	nsv588293	chr22:20732809-21004476	Bivalent/Poised TSS Strong transcription Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
20	nsv948669	chr22:20732809-21461607	Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
21	nsv531746	chr22:20733427-21505417	Strong transcription Flanking Active TSS Weak transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
22	nsv588294	chr22:20733495-21365384	Bivalent Enhancer Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	92 gene(s)	inside rSNPs	diseases
23	nsv588295	chr22:20733495-21462353	Flanking Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
24	nsv588296	chr22:20733495-21465780	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
25	nsv1056065	chr22:20734244-21460658	Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
26	nsv544586	chr22:20734244-21460658	Strong transcription Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
27	nsv1067074	chr22:20739124-21440654	Flanking Active TSS Weak transcription Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
28	nsv544587	chr22:20739124-21440654	Weak transcription Strong transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
29	nsv1066482	chr22:20739125-21440655	Enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
30	nsv544588	chr22:20739125-21440655	Strong transcription Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
31	nsv1065725	chr22:20739324-20927615	Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
32	nsv544589	chr22:20739324-20927615	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
33	nsv1063333	chr22:20739324-21353297	Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
34	nsv544590	chr22:20739324-21353297	Genic enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
35	nsv1059978	chr22:20739324-21440515	Genic enhancers Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
36	nsv544591	chr22:20739324-21440515	Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
37	nsv949306	chr22:20742450-21461607	Weak transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
38	nsv523162	chr22:20743536-21462353	Enhancers Strong transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
39	nsv1056565	chr22:20745762-21460658	Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
40	nsv529335	chr22:20748976-21499971	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	101 gene(s)	inside rSNPs	diseases
41	nsv533337	chr22:20754407-21440515	Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
42	nsv918090	chr22:20754421-21505417	Flanking Active TSS Enhancers Genic enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
43	nsv491620	chr22:20754422-21440514	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
44	nsv1067639	chr22:20754422-21505417	Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
45	nsv529720	chr22:20754422-21505417	Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
46	nsv834138	chr22:20759359-20951242	Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
47	nsv1058923	chr22:20855359-21000991	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
48	nsv1065938	chr22:20863293-20992701	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
49	nsv544593	chr22:20863293-20992701	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
50	esv1841141	chr22:20891259-20908736	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:20864400-20913000	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr22:20886000-20915400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr22:20890800-20923000	Strong transcription	Monocytes-CD14+_RO01746	blood
4	chr22:20893000-20907400	Weak transcription	Hela-S3	cervix
5	chr22:20900600-20912800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr22:20902600-20908200	Enhancers	Left Ventricle	heart
7	chr22:20902800-20906600	Genic enhancers	GM12878-XiMat	blood
8	chr22:20902800-20907000	Genic enhancers	Primary mononuclear cells fromperipheralblood	Blood
9	chr22:20902800-20911000	Enhancers	Fetal Heart	heart
10	chr22:20903000-20906600	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr22:20903000-20907000	Genic enhancers	NHLF	lung
12	chr22:20903000-20907400	Genic enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr22:20903000-20907600	Enhancers	Psoas Muscle	Psoas
14	chr22:20903000-20908600	Enhancers	Brain Angular Gyrus	brain
15	chr22:20903000-20910000	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr22:20903200-20906600	Flanking Active TSS	Primary T cells from cord blood	blood
17	chr22:20903200-20907400	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr22:20903200-20913200	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
19	chr22:20903400-20910200	Enhancers	Right Atrium	heart
20	chr22:20903400-20915200	Strong transcription	NHEK	skin
21	chr22:20903600-20906600	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
22	chr22:20903600-20906800	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
23	chr22:20903600-20908400	Enhancers	Ovary	ovary
24	chr22:20903800-20907000	Genic enhancers	Esophagus	oesophagus
25	chr22:20904200-20907200	Genic enhancers	Fetal Thymus	thymus
26	chr22:20904200-20917200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr22:20904400-20907000	Flanking Active TSS	Rectal Smooth Muscle	rectum
28	chr22:20904400-20910800	Weak transcription	Fetal Brain Male	brain
29	chr22:20904600-20910800	Strong transcription	Dnd41	blood
30	chr22:20904600-20911400	Strong transcription	Primary neutrophils fromperipheralblood	blood
31	chr22:20904800-20907000	Transcr. at gene 5' and 3'	Rectal Mucosa Donor 29	rectum
32	chr22:20904800-20907200	Genic enhancers	Spleen	Spleen
33	chr22:20905000-20906600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr22:20905000-20906800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
35	chr22:20905000-20906800	Genic enhancers	HepG2	liver
36	chr22:20905000-20907400	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
37	chr22:20905000-20908600	Genic enhancers	Fetal Stomach	stomach
38	chr22:20905000-20909200	Genic enhancers	Sigmoid Colon	Sigmoid Colon
39	chr22:20905000-20911000	Strong transcription	Thymus	Thymus
40	chr22:20905000-20923000	Strong transcription	Primary monocytes fromperipheralblood	blood
41	chr22:20905200-20906600	Transcr. at gene 5' and 3'	Duodenum Smooth Muscle	Duodenum
42	chr22:20905200-20907400	Genic enhancers	Right Ventricle	heart
43	chr22:20905200-20907400	Transcr. at gene 5' and 3'	Stomach Smooth Muscle	stomach
44	chr22:20905200-20908800	Genic enhancers	Duodenum Mucosa	Duodenum
45	chr22:20905400-20906600	Enhancers	Stomach Mucosa	stomach
46	chr22:20905400-20906600	Enhancers	A549	lung
47	chr22:20905400-20906800	Genic enhancers	Colonic Mucosa	Colon
48	chr22:20905400-20908200	Enhancers	Brain Inferior Temporal Lobe	brain
49	chr22:20905400-20909400	Genic enhancers	Lung	lung
50	chr22:20905400-20913400	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood

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