Variant report

Variant rs28446864
Chromosome Location chr21:48022689-48022690
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:48018000-48024600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr21:48018000-48025000 Weak transcription Spleen Spleen
3 chr21:48018600-48022800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr21:48018600-48023200 Enhancers K562 blood
5 chr21:48018800-48024600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr21:48019200-48024400 Weak transcription Right Atrium heart
7 chr21:48019400-48023800 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr21:48019400-48024400 Weak transcription Fetal Thymus thymus
9 chr21:48019400-48024800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr21:48019400-48024800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr21:48019600-48024600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr21:48019800-48024600 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr21:48019800-48024800 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr21:48019800-48025000 Weak transcription Fetal Brain Male brain
15 chr21:48019800-48025800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr21:48020000-48023800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr21:48020000-48024400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr21:48020000-48024800 Weak transcription Osteobl bone
19 chr21:48020200-48023400 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr21:48020400-48024000 Weak transcription Primary T cells from cord blood blood
21 chr21:48020600-48024400 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr21:48020800-48022800 Transcr. at gene 5' and 3' Brain Cingulate Gyrus brain
23 chr21:48020800-48022800 Enhancers Stomach Mucosa stomach
24 chr21:48021000-48022800 Enhancers Ovary ovary
25 chr21:48021200-48022800 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
26 chr21:48021200-48024400 Weak transcription Adipose Nuclei Adipose
27 chr21:48021200-48024600 Enhancers Primary hematopoietic stem cells short term culture blood
28 chr21:48021400-48022800 Weak transcription ES-WA7 Cell Line embryonic stem cell
29 chr21:48021400-48022800 Transcr. at gene 5' and 3' Brain Hippocampus Middle brain
30 chr21:48021400-48024600 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr21:48021600-48022800 Enhancers Fetal Lung lung
32 chr21:48021600-48023200 Active TSS Duodenum Smooth Muscle Duodenum
33 chr21:48021800-48024800 Weak transcription Primary T cells fromperipheralblood blood
34 chr21:48022000-48022800 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr21:48022000-48022800 Flanking Active TSS Brain Angular Gyrus brain
36 chr21:48022000-48026200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr21:48022200-48022800 Enhancers iPS-15b Cell Line embryonic stem cell
38 chr21:48022200-48022800 Enhancers Fetal Muscle Leg muscle
39 chr21:48022200-48022800 Enhancers Placenta Placenta
40 chr21:48022200-48023000 Enhancers HUES6 Cell Line embryonic stem cell
41 chr21:48022200-48023600 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr21:48022200-48024600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr21:48022200-48024800 Weak transcription Primary hematopoietic stem cells blood
44 chr21:48022400-48022800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr21:48022400-48022800 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr21:48022400-48022800 Flanking Active TSS Brain Anterior Caudate brain
47 chr21:48022400-48023000 Enhancers HUES48 Cell Line embryonic stem cell
48 chr21:48022400-48023600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr21:48022600-48022800 Transcr. at gene 5' and 3' Cortex derived primary cultured neurospheres brain
50 chr21:48022600-48022800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin

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