Variant report

Variant rs41387548
Chromosome Location chr21:48020101-48020102
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:48017600-48020200 Enhancers Primary T killer naive cells fromperipheralblood blood
2 chr21:48017800-48020800 Enhancers Primary T helper cells PMA-I stimulated --
3 chr21:48018000-48020600 Enhancers Ovary ovary
4 chr21:48018000-48022200 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr21:48018000-48024600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr21:48018000-48025000 Weak transcription Spleen Spleen
7 chr21:48018400-48020800 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
8 chr21:48018400-48021600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr21:48018600-48020200 Enhancers HUVEC blood vessel
10 chr21:48018600-48020400 Enhancers Primary T cells from cord blood blood
11 chr21:48018600-48020400 Enhancers Adipose Nuclei Adipose
12 chr21:48018600-48020400 Enhancers Brain Inferior Temporal Lobe brain
13 chr21:48018600-48020600 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr21:48018600-48020600 Enhancers Fetal Muscle Leg muscle
15 chr21:48018600-48020800 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr21:48018600-48021000 Enhancers Brain Angular Gyrus brain
17 chr21:48018600-48021200 Enhancers Brain Anterior Caudate brain
18 chr21:48018600-48022200 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr21:48018600-48022600 Genic enhancers Cortex derived primary cultured neurospheres brain
20 chr21:48018600-48022800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr21:48018600-48023200 Enhancers K562 blood
22 chr21:48018800-48024600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr21:48019200-48020800 Genic enhancers Brain Cingulate Gyrus brain
24 chr21:48019200-48020800 Enhancers HepG2 liver
25 chr21:48019200-48021000 Enhancers Brain Hippocampus Middle brain
26 chr21:48019200-48021200 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
27 chr21:48019200-48022200 Weak transcription Fetal Muscle Trunk muscle
28 chr21:48019200-48024400 Weak transcription Right Atrium heart
29 chr21:48019400-48020800 Weak transcription Primary T cells fromperipheralblood blood
30 chr21:48019400-48021000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr21:48019400-48021200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr21:48019400-48022200 Weak transcription Placenta Placenta
33 chr21:48019400-48022600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
34 chr21:48019400-48022600 Weak transcription Fetal Stomach stomach
35 chr21:48019400-48023800 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr21:48019400-48024400 Weak transcription Fetal Thymus thymus
37 chr21:48019400-48024800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr21:48019400-48024800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr21:48019600-48020800 Genic enhancers Brain Substantia Nigra brain
40 chr21:48019600-48020800 Weak transcription Stomach Mucosa stomach
41 chr21:48019600-48022400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr21:48019600-48024600 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr21:48019800-48021000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr21:48019800-48021400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr21:48019800-48021600 Weak transcription Fetal Lung lung
46 chr21:48019800-48022600 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr21:48019800-48022600 Weak transcription HSMMtube muscle
48 chr21:48019800-48024600 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr21:48019800-48024800 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr21:48019800-48025000 Weak transcription Fetal Brain Male brain

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