The 2.0 version of rSNPBase

Variant report

Variant rs28460865
Chromosome Location chr2:74279878-74279879
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:74264800-74311000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr2:74265000-74300600 Weak transcription Fetal Brain Male brain
3 chr2:74265400-74315000 Weak transcription HUVEC blood vessel
4 chr2:74266400-74287200 Weak transcription HSMM muscle
5 chr2:74269000-74280200 Weak transcription HSMMtube muscle
6 chr2:74269000-74300200 Weak transcription Fetal Kidney kidney
7 chr2:74269800-74328000 Weak transcription Psoas Muscle Psoas
8 chr2:74270600-74280800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr2:74270600-74281600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr2:74270800-74280400 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr2:74271000-74280200 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr2:74271600-74287600 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr2:74272800-74285600 Weak transcription Placenta Amnion Placenta Amnion
14 chr2:74273000-74282600 Weak transcription Right Atrium heart
15 chr2:74273000-74285000 Weak transcription HMEC breast
16 chr2:74273200-74293800 Weak transcription Fetal Lung lung
17 chr2:74274200-74280000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr2:74274400-74286400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr2:74274800-74281000 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr2:74275200-74307800 Weak transcription Aorta Aorta
21 chr2:74275600-74280400 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr2:74275600-74285800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr2:74275600-74304000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr2:74275800-74281000 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr2:74275800-74301400 Weak transcription A549 lung
26 chr2:74275800-74301600 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr2:74275800-74307800 Weak transcription H1 Cell Line embryonic stem cell
28 chr2:74275800-74317000 Weak transcription Muscle Satellite Cultured Cells --
29 chr2:74276000-74280400 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr2:74276000-74280400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr2:74276000-74285800 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr2:74276000-74294800 Weak transcription Right Ventricle heart
33 chr2:74276200-74280400 Weak transcription Placenta Placenta
34 chr2:74276200-74280800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr2:74276200-74307600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr2:74276600-74280400 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr2:74276600-74281600 Enhancers Brain Hippocampus Middle brain
38 chr2:74276600-74284000 Weak transcription H9 Cell Line embryonic stem cell
39 chr2:74276600-74286000 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr2:74276600-74293600 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr2:74276600-74293800 Weak transcription Fetal Brain Female brain
42 chr2:74276600-74294800 Weak transcription Lung lung
43 chr2:74276800-74280400 Weak transcription Primary hematopoietic stem cells blood
44 chr2:74276800-74280400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr2:74276800-74281000 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr2:74276800-74281200 Weak transcription Pancreas Pancrea
47 chr2:74276800-74285200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr2:74276800-74286800 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr2:74276800-74300800 Weak transcription Liver Liver
50 chr2:74276800-74307400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015